Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.59□□□□□ -0.39
CCL3L1P16619 RPSAP52-203ENST00000622976 1023 ntBASIC12.59□□□□□ -0.39
CCL3L1P16619 AL591163.1-201ENST00000641757 987 ntBASIC12.59□□□□□ -0.39
CCL3L1P16619 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.59□□□□□ -0.39
CCL3L1P16619 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.59□□□□□ -0.39
CCL3L1P16619 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CCL3L1P16619 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 AL596257.1-201ENST00000641463 2694 ntBASIC12.59□□□□□ -0.39
CCL3L1P16619 MSTO2P-201ENST00000314835 1709 ntBASIC12.59□□□□□ -0.39
CCL3L1P16619 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.59□□□□□ -0.39
CCL3L1P16619 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
CCL3L1P16619 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CCL3L1P16619 AC011270.2-201ENST00000624293 2550 ntBASIC12.59□□□□□ -0.39
CCL3L1P16619 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CCL3L1P16619 AL360270.3-201ENST00000609118 1348 ntBASIC12.59□□□□□ -0.39
CCL3L1P16619 TNRC18P2-201ENST00000417666 2714 ntBASIC12.59□□□□□ -0.39
CCL3L1P16619 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.59□□□□□ -0.39
CCL3L1P16619 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCL3L1P16619 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CCL3L1P16619 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.39
CCL3L1P16619 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CCL3L1P16619 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL3L1P16619 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL3L1P16619 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CCL3L1P16619 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL3L1P16619 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL3L1P16619 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL3L1P16619 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
CCL3L1P16619 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
CCL3L1P16619 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL3L1P16619 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CCL3L1P16619 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL3L1P16619 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CCL3L1P16619 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
CCL3L1P16619 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.58□□□□□ -0.4
CCL3L1P16619 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
CCL3L1P16619 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCL3L1P16619 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.58□□□□□ -0.4
CCL3L1P16619 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
CCL3L1P16619 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.58□□□□□ -0.4
CCL3L1P16619 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
CCL3L1P16619 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.58□□□□□ -0.4
CCL3L1P16619 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL3L1P16619 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.58□□□□□ -0.4
CCL3L1P16619 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.58□□□□□ -0.4
CCL3L1P16619 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.58□□□□□ -0.4
CCL3L1P16619 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCL3L1P16619 AC093433.1-201ENST00000458048 571 ntBASIC12.58□□□□□ -0.4
CCL3L1P16619 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.58□□□□□ -0.4
CCL3L1P16619 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.58□□□□□ -0.4
CCL3L1P16619 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CCL3L1P16619 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCL3L1P16619 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.58□□□□□ -0.4
CCL3L1P16619 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.58□□□□□ -0.4
CCL3L1P16619 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.58□□□□□ -0.4
CCL3L1P16619 AP001063.1-201ENST00000568332 529 ntBASIC12.58□□□□□ -0.4
CCL3L1P16619 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.58□□□□□ -0.4
CCL3L1P16619 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.58□□□□□ -0.4
CCL3L1P16619 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CCL3L1P16619 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CCL3L1P16619 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL3L1P16619 AC012645.4-201ENST00000610691 1061 ntBASIC12.58□□□□□ -0.4
CCL3L1P16619 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL3L1P16619 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CCL3L1P16619 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL3L1P16619 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL3L1P16619 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
CCL3L1P16619 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.58□□□□□ -0.4
CCL3L1P16619 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL3L1P16619 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL3L1P16619 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCL3L1P16619 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.58□□□□□ -0.4
CCL3L1P16619 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL3L1P16619 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.58□□□□□ -0.4
CCL3L1P16619 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CCL3L1P16619 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL3L1P16619 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.58□□□□□ -0.4
CCL3L1P16619 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
CCL3L1P16619 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL3L1P16619 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL3L1P16619 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CCL3L1P16619 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CCL3L1P16619 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCL3L1P16619 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.58□□□□□ -0.4
CCL3L1P16619 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.58□□□□□ -0.4
CCL3L1P16619 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.58□□□□□ -0.4
CCL3L1P16619 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCL3L1P16619 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL3L1P16619 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.57□□□□□ -0.4
CCL3L1P16619 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.57□□□□□ -0.4
CCL3L1P16619 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms