Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2AFXP16104 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2AFXP16104 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2AFXP16104 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2AFXP16104 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2AFXP16104 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
H2AFXP16104 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
H2AFXP16104 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
H2AFXP16104 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2AFXP16104 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2AFXP16104 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
H2AFXP16104 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2AFXP16104 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
H2AFXP16104 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC15.8■□□□□ 0.12
H2AFXP16104 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2AFXP16104 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2AFXP16104 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.8■□□□□ 0.12
H2AFXP16104 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
H2AFXP16104 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.8■□□□□ 0.12
H2AFXP16104 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
H2AFXP16104 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.8■□□□□ 0.12
H2AFXP16104 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
H2AFXP16104 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2AFXP16104 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2AFXP16104 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
H2AFXP16104 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
H2AFXP16104 AC131902.2-201ENST00000566892 2172 ntBASIC15.8■□□□□ 0.12
H2AFXP16104 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2AFXP16104 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC15.8■□□□□ 0.12
H2AFXP16104 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2AFXP16104 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
H2AFXP16104 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
H2AFXP16104 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.8■□□□□ 0.12
H2AFXP16104 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2AFXP16104 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
H2AFXP16104 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
H2AFXP16104 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
H2AFXP16104 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2AFXP16104 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2AFXP16104 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
H2AFXP16104 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2AFXP16104 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC15.79■□□□□ 0.12
H2AFXP16104 CICP1-201ENST00000416803 2410 ntBASIC15.79■□□□□ 0.12
H2AFXP16104 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC15.79■□□□□ 0.12
H2AFXP16104 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC15.79■□□□□ 0.12
H2AFXP16104 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2AFXP16104 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H2AFXP16104 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC15.79■□□□□ 0.12
H2AFXP16104 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.79■□□□□ 0.12
H2AFXP16104 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H2AFXP16104 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
H2AFXP16104 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.79■□□□□ 0.12
H2AFXP16104 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2AFXP16104 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2AFXP16104 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.79■□□□□ 0.12
H2AFXP16104 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H2AFXP16104 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2AFXP16104 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.79■□□□□ 0.12
H2AFXP16104 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2AFXP16104 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.79■□□□□ 0.12
H2AFXP16104 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.79■□□□□ 0.12
H2AFXP16104 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2AFXP16104 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2AFXP16104 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
H2AFXP16104 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
H2AFXP16104 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.79■□□□□ 0.12
H2AFXP16104 AL139010.1-201ENST00000454878 894 ntBASIC15.79■□□□□ 0.12
H2AFXP16104 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.79■□□□□ 0.12
H2AFXP16104 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.79■□□□□ 0.12
H2AFXP16104 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
H2AFXP16104 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.79■□□□□ 0.12
H2AFXP16104 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
H2AFXP16104 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.79■□□□□ 0.12
H2AFXP16104 AC116407.4-201ENST00000623319 1061 ntBASIC15.79■□□□□ 0.12
H2AFXP16104 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H2AFXP16104 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H2AFXP16104 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H2AFXP16104 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2AFXP16104 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2AFXP16104 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.79■□□□□ 0.12
H2AFXP16104 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2AFXP16104 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2AFXP16104 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H2AFXP16104 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2AFXP16104 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.79■□□□□ 0.12
H2AFXP16104 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2AFXP16104 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2AFXP16104 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC15.79■□□□□ 0.12
H2AFXP16104 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H2AFXP16104 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.78■□□□□ 0.12
H2AFXP16104 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2AFXP16104 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2AFXP16104 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
H2AFXP16104 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2AFXP16104 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2AFXP16104 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
H2AFXP16104 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.78■□□□□ 0.12
H2AFXP16104 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.78■□□□□ 0.12
H2AFXP16104 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2AFXP16104 VENTXP1-201ENST00000569334 2716 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms