Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL5A2P05997 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC19.5■□□□□ 0.71
COL5A2P05997 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL5A2P05997 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL5A2P05997 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL5A2P05997 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL5A2P05997 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL5A2P05997 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL5A2P05997 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL5A2P05997 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.49■□□□□ 0.71
COL5A2P05997 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.49■□□□□ 0.71
COL5A2P05997 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COL5A2P05997 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL5A2P05997 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL5A2P05997 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL5A2P05997 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
COL5A2P05997 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
COL5A2P05997 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC19.49■□□□□ 0.71
COL5A2P05997 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC19.49■□□□□ 0.71
COL5A2P05997 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL5A2P05997 GUSBP10-201ENST00000417412 665 ntBASIC19.49■□□□□ 0.71
COL5A2P05997 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC19.49■□□□□ 0.71
COL5A2P05997 AP003398.1-201ENST00000531124 318 ntBASIC19.49■□□□□ 0.71
COL5A2P05997 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
COL5A2P05997 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL5A2P05997 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
COL5A2P05997 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL5A2P05997 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL5A2P05997 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
COL5A2P05997 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL5A2P05997 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COL5A2P05997 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COL5A2P05997 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC19.49■□□□□ 0.71
COL5A2P05997 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC19.49■□□□□ 0.71
COL5A2P05997 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.49■□□□□ 0.71
COL5A2P05997 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC19.49■□□□□ 0.71
COL5A2P05997 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL5A2P05997 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
COL5A2P05997 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL5A2P05997 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL5A2P05997 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL5A2P05997 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
COL5A2P05997 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
COL5A2P05997 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL5A2P05997 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL5A2P05997 DUX4L50-201ENST00000455245 715 ntBASIC19.48■□□□□ 0.71
COL5A2P05997 RN7SL396P-201ENST00000471086 295 ntBASIC19.48■□□□□ 0.71
COL5A2P05997 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC19.48■□□□□ 0.71
COL5A2P05997 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC19.48■□□□□ 0.71
COL5A2P05997 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC19.48■□□□□ 0.71
COL5A2P05997 RN7SL596P-201ENST00000582123 288 ntBASIC19.48■□□□□ 0.71
COL5A2P05997 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC19.48■□□□□ 0.71
COL5A2P05997 AC244250.3-201ENST00000620749 366 ntBASIC19.48■□□□□ 0.71
COL5A2P05997 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC19.48■□□□□ 0.71
COL5A2P05997 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL5A2P05997 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL5A2P05997 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
COL5A2P05997 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
COL5A2P05997 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL5A2P05997 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL5A2P05997 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL5A2P05997 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
COL5A2P05997 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL5A2P05997 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL5A2P05997 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL5A2P05997 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL5A2P05997 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL5A2P05997 R3HDM2P2-201ENST00000401880 2116 ntBASIC19.48■□□□□ 0.71
COL5A2P05997 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
COL5A2P05997 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.48■□□□□ 0.71
COL5A2P05997 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC19.48■□□□□ 0.71
COL5A2P05997 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL5A2P05997 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.48■□□□□ 0.71
COL5A2P05997 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL5A2P05997 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC19.48■□□□□ 0.71
COL5A2P05997 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL5A2P05997 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL5A2P05997 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.48■□□□□ 0.71
COL5A2P05997 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
COL5A2P05997 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC19.48■□□□□ 0.71
COL5A2P05997 BCAS2P2-201ENST00000425064 674 ntBASIC19.48■□□□□ 0.71
COL5A2P05997 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC19.48■□□□□ 0.71
COL5A2P05997 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL5A2P05997 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL5A2P05997 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC19.48■□□□□ 0.71
COL5A2P05997 AC007952.4-201ENST00000573866 637 ntBASIC19.48■□□□□ 0.71
COL5A2P05997 DBP-202ENST00000593500 712 ntTSL 2 BASIC19.48■□□□□ 0.71
COL5A2P05997 AC006158.1-201ENST00000610661 249 ntBASIC19.48■□□□□ 0.71
COL5A2P05997 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.47■□□□□ 0.71
COL5A2P05997 AL513523.2-202ENST00000427283 2040 ntBASIC19.47■□□□□ 0.71
COL5A2P05997 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL5A2P05997 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC19.47■□□□□ 0.71
COL5A2P05997 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL5A2P05997 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC19.47■□□□□ 0.71
COL5A2P05997 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL5A2P05997 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC19.47■□□□□ 0.71
COL5A2P05997 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL5A2P05997 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL5A2P05997 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
COL5A2P05997 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms