Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.71■□□□□ 0.27
CD4P01730 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.71■□□□□ 0.27
CD4P01730 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD4P01730 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CD4P01730 AC234782.1-201ENST00000451950 919 ntBASIC16.71■□□□□ 0.27
CD4P01730 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.71■□□□□ 0.27
CD4P01730 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.71■□□□□ 0.27
CD4P01730 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.71■□□□□ 0.27
CD4P01730 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.71■□□□□ 0.27
CD4P01730 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CD4P01730 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD4P01730 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD4P01730 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD4P01730 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD4P01730 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD4P01730 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CD4P01730 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CD4P01730 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CD4P01730 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD4P01730 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CD4P01730 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD4P01730 AP000593.2-201ENST00000542775 1433 ntBASIC16.7■□□□□ 0.26
CD4P01730 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.7■□□□□ 0.26
CD4P01730 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD4P01730 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD4P01730 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD4P01730 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CD4P01730 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD4P01730 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CD4P01730 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD4P01730 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CD4P01730 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD4P01730 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.7■□□□□ 0.26
CD4P01730 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD4P01730 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD4P01730 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.7■□□□□ 0.26
CD4P01730 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD4P01730 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD4P01730 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
CD4P01730 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD4P01730 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.7■□□□□ 0.26
CD4P01730 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CD4P01730 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD4P01730 HLA-K-203ENST00000430151 1046 ntBASIC16.7■□□□□ 0.26
CD4P01730 AC006335.1-201ENST00000445200 547 ntBASIC16.7■□□□□ 0.26
CD4P01730 MIR4683-201ENST00000579659 81 ntBASIC16.7■□□□□ 0.26
CD4P01730 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.7■□□□□ 0.26
CD4P01730 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.7■□□□□ 0.26
CD4P01730 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.7■□□□□ 0.26
CD4P01730 AL353770.1-201ENST00000614915 403 ntBASIC16.7■□□□□ 0.26
CD4P01730 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.7■□□□□ 0.26
CD4P01730 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD4P01730 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CD4P01730 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD4P01730 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD4P01730 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD4P01730 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.7■□□□□ 0.26
CD4P01730 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD4P01730 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD4P01730 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD4P01730 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.7■□□□□ 0.26
CD4P01730 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CD4P01730 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.7■□□□□ 0.26
CD4P01730 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD4P01730 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CD4P01730 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD4P01730 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.7■□□□□ 0.26
CD4P01730 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CD4P01730 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
CD4P01730 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.69■□□□□ 0.26
CD4P01730 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CD4P01730 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CD4P01730 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
CD4P01730 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.69■□□□□ 0.26
CD4P01730 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CD4P01730 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CD4P01730 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CD4P01730 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.69■□□□□ 0.26
CD4P01730 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
CD4P01730 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD4P01730 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.69■□□□□ 0.26
CD4P01730 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.69■□□□□ 0.26
CD4P01730 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.69■□□□□ 0.26
CD4P01730 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.69■□□□□ 0.26
CD4P01730 AC125604.1-201ENST00000496255 707 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms