Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MIR4259-201ENST00000584466 101 ntBASIC13.61□□□□□ -0.23
CNOT4O95628 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.61□□□□□ -0.23
CNOT4O95628 AL606495.2-201ENST00000605867 535 ntBASIC13.61□□□□□ -0.23
CNOT4O95628 AP005019.2-201ENST00000615104 511 ntBASIC13.61□□□□□ -0.23
CNOT4O95628 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.61□□□□□ -0.23
CNOT4O95628 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNOT4O95628 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.61□□□□□ -0.23
CNOT4O95628 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNOT4O95628 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNOT4O95628 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNOT4O95628 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.61□□□□□ -0.23
CNOT4O95628 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.61□□□□□ -0.23
CNOT4O95628 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.61□□□□□ -0.23
CNOT4O95628 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNOT4O95628 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.61□□□□□ -0.23
CNOT4O95628 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNOT4O95628 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNOT4O95628 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNOT4O95628 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.61□□□□□ -0.23
CNOT4O95628 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CNOT4O95628 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNOT4O95628 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNOT4O95628 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNOT4O95628 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CNOT4O95628 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CNOT4O95628 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CNOT4O95628 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.6□□□□□ -0.23
CNOT4O95628 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.6□□□□□ -0.23
CNOT4O95628 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
CNOT4O95628 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.6□□□□□ -0.23
CNOT4O95628 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CNOT4O95628 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.6□□□□□ -0.23
CNOT4O95628 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.6□□□□□ -0.23
CNOT4O95628 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.6□□□□□ -0.23
CNOT4O95628 AC005229.1-201ENST00000392885 409 ntBASIC13.6□□□□□ -0.23
CNOT4O95628 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CNOT4O95628 BOLA2P3-201ENST00000404566 256 ntBASIC13.6□□□□□ -0.23
CNOT4O95628 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.6□□□□□ -0.23
CNOT4O95628 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.6□□□□□ -0.23
CNOT4O95628 KRT43P-201ENST00000434019 910 ntBASIC13.6□□□□□ -0.23
CNOT4O95628 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.6□□□□□ -0.23
CNOT4O95628 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CNOT4O95628 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CNOT4O95628 AC022137.2-201ENST00000503482 481 ntBASIC13.6□□□□□ -0.23
CNOT4O95628 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CNOT4O95628 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CNOT4O95628 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.6□□□□□ -0.23
CNOT4O95628 MIR5189-201ENST00000577370 114 ntBASIC13.6□□□□□ -0.23
CNOT4O95628 MIR4525-201ENST00000580000 75 ntBASIC13.6□□□□□ -0.23
CNOT4O95628 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.6□□□□□ -0.23
CNOT4O95628 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.6□□□□□ -0.23
CNOT4O95628 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CNOT4O95628 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CNOT4O95628 BX539320.1-201ENST00000623759 877 ntBASIC13.6□□□□□ -0.23
CNOT4O95628 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.6□□□□□ -0.23
CNOT4O95628 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNOT4O95628 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
CNOT4O95628 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CNOT4O95628 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CNOT4O95628 REXO1L6P-201ENST00000603433 1515 ntBASIC13.59□□□□□ -0.23
CNOT4O95628 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CNOT4O95628 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.59□□□□□ -0.23
CNOT4O95628 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CNOT4O95628 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
CNOT4O95628 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms