Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.43□□□□□ -0.1
SNX4O95219 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 AC041040.2-201ENST00000622926 2899 ntBASIC14.43□□□□□ -0.1
SNX4O95219 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.43□□□□□ -0.1
SNX4O95219 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX4O95219 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.42□□□□□ -0.1
SNX4O95219 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX4O95219 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SNX4O95219 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX4O95219 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX4O95219 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.42□□□□□ -0.1
SNX4O95219 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
SNX4O95219 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX4O95219 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNX4O95219 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNX4O95219 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SNX4O95219 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX4O95219 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.42□□□□□ -0.1
SNX4O95219 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.42□□□□□ -0.1
SNX4O95219 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SNX4O95219 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX4O95219 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX4O95219 TOMM22P5-201ENST00000416399 439 ntBASIC14.42□□□□□ -0.1
SNX4O95219 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SNX4O95219 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.42□□□□□ -0.1
SNX4O95219 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SNX4O95219 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.42□□□□□ -0.1
SNX4O95219 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.42□□□□□ -0.1
SNX4O95219 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.42□□□□□ -0.1
SNX4O95219 RARRES2P5-201ENST00000564013 466 ntBASIC14.42□□□□□ -0.1
SNX4O95219 SPDYE22P-201ENST00000582158 798 ntBASIC14.42□□□□□ -0.1
SNX4O95219 LINC01115-203ENST00000606068 577 ntBASIC14.42□□□□□ -0.1
SNX4O95219 AL662799.1-202ENST00000614205 422 ntBASIC14.42□□□□□ -0.1
SNX4O95219 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNX4O95219 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.42□□□□□ -0.1
SNX4O95219 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX4O95219 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNX4O95219 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SNX4O95219 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.42□□□□□ -0.1
SNX4O95219 SLC7A15P-201ENST00000424028 1363 ntBASIC14.42□□□□□ -0.1
SNX4O95219 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SNX4O95219 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.42□□□□□ -0.1
SNX4O95219 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNX4O95219 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.42□□□□□ -0.1
SNX4O95219 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX4O95219 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SNX4O95219 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SNX4O95219 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.42□□□□□ -0.1
SNX4O95219 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SNX4O95219 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.42□□□□□ -0.1
SNX4O95219 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX4O95219 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX4O95219 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SNX4O95219 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SNX4O95219 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX4O95219 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX4O95219 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNX4O95219 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX4O95219 PTENP1-202ENST00000532280 3996 ntBASIC14.41□□□□□ -0.1
SNX4O95219 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.41□□□□□ -0.1
SNX4O95219 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.41□□□□□ -0.1
SNX4O95219 AC005840.4-201ENST00000541242 2494 ntBASIC14.41□□□□□ -0.1
SNX4O95219 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.41□□□□□ -0.1
SNX4O95219 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX4O95219 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
SNX4O95219 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.41□□□□□ -0.1
SNX4O95219 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX4O95219 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SNX4O95219 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
SNX4O95219 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX4O95219 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX4O95219 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX4O95219 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX4O95219 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX4O95219 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX4O95219 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SNX4O95219 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX4O95219 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.41□□□□□ -0.1
SNX4O95219 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
SNX4O95219 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.41□□□□□ -0.1
SNX4O95219 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX4O95219 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SNX4O95219 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SNX4O95219 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX4O95219 AC074338.1-201ENST00000416825 156 ntBASIC14.41□□□□□ -0.1
SNX4O95219 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.41□□□□□ -0.1
SNX4O95219 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.41□□□□□ -0.1
SNX4O95219 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX4O95219 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX4O95219 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SNX4O95219 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX4O95219 AC140912.1-201ENST00000577171 1054 ntBASIC14.41□□□□□ -0.1
SNX4O95219 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms