Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDM4BO94953 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.49□□□□□ -0.25
KDM4BO94953 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
KDM4BO94953 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
KDM4BO94953 ELL2P1-201ENST00000413990 1906 ntBASIC13.49□□□□□ -0.25
KDM4BO94953 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.49□□□□□ -0.25
KDM4BO94953 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
KDM4BO94953 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KDM4BO94953 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDM4BO94953 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
KDM4BO94953 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
KDM4BO94953 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.49□□□□□ -0.25
KDM4BO94953 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDM4BO94953 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
KDM4BO94953 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KDM4BO94953 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDM4BO94953 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.49□□□□□ -0.25
KDM4BO94953 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.49□□□□□ -0.25
KDM4BO94953 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDM4BO94953 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.49□□□□□ -0.25
KDM4BO94953 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.49□□□□□ -0.25
KDM4BO94953 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KDM4BO94953 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
KDM4BO94953 AC105339.1-204ENST00000636249 355 ntBASIC13.49□□□□□ -0.25
KDM4BO94953 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.49□□□□□ -0.25
KDM4BO94953 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
KDM4BO94953 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDM4BO94953 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDM4BO94953 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDM4BO94953 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KDM4BO94953 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
KDM4BO94953 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDM4BO94953 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDM4BO94953 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDM4BO94953 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDM4BO94953 CICP8-201ENST00000455800 2813 ntBASIC13.49□□□□□ -0.25
KDM4BO94953 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.49□□□□□ -0.25
KDM4BO94953 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDM4BO94953 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDM4BO94953 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.49□□□□□ -0.25
KDM4BO94953 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.49□□□□□ -0.25
KDM4BO94953 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KDM4BO94953 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.48□□□□□ -0.25
KDM4BO94953 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
KDM4BO94953 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDM4BO94953 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
KDM4BO94953 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDM4BO94953 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
KDM4BO94953 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
KDM4BO94953 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDM4BO94953 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDM4BO94953 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDM4BO94953 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KDM4BO94953 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDM4BO94953 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDM4BO94953 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.48□□□□□ -0.25
KDM4BO94953 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDM4BO94953 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDM4BO94953 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDM4BO94953 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDM4BO94953 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.48□□□□□ -0.25
KDM4BO94953 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
KDM4BO94953 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
KDM4BO94953 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.48□□□□□ -0.25
KDM4BO94953 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.48□□□□□ -0.25
KDM4BO94953 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.48□□□□□ -0.25
KDM4BO94953 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.48□□□□□ -0.25
KDM4BO94953 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.48□□□□□ -0.25
KDM4BO94953 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
KDM4BO94953 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.48□□□□□ -0.25
KDM4BO94953 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
KDM4BO94953 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDM4BO94953 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.48□□□□□ -0.25
KDM4BO94953 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDM4BO94953 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
KDM4BO94953 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDM4BO94953 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.48□□□□□ -0.25
KDM4BO94953 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDM4BO94953 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.48□□□□□ -0.25
KDM4BO94953 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.48□□□□□ -0.25
KDM4BO94953 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDM4BO94953 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.48□□□□□ -0.25
KDM4BO94953 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
KDM4BO94953 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KDM4BO94953 PEG13-201ENST00000631594 5667 ntBASIC13.48□□□□□ -0.25
KDM4BO94953 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
KDM4BO94953 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
KDM4BO94953 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
KDM4BO94953 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KDM4BO94953 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
KDM4BO94953 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.47□□□□□ -0.25
KDM4BO94953 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KDM4BO94953 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
KDM4BO94953 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KDM4BO94953 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.47□□□□□ -0.25
KDM4BO94953 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.47□□□□□ -0.25
KDM4BO94953 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
KDM4BO94953 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KDM4BO94953 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
KDM4BO94953 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms