Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.26■□□□□ 0.19
O00370 PRSS30P-206ENST00000641773 873 ntBASIC16.26■□□□□ 0.19
O00370 AC105233.6-201ENST00000642093 218 ntBASIC16.26■□□□□ 0.19
O00370 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
O00370 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
O00370 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
O00370 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
O00370 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
O00370 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
O00370 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
O00370 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
O00370 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
O00370 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.26■□□□□ 0.19
O00370 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
O00370 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
O00370 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.26■□□□□ 0.19
O00370 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
O00370 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.26■□□□□ 0.19
O00370 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
O00370 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
O00370 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
O00370 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
O00370 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
O00370 REXO1L2P-201ENST00000425429 2069 ntBASIC16.25■□□□□ 0.19
O00370 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
O00370 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
O00370 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
O00370 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
O00370 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
O00370 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.25■□□□□ 0.19
O00370 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
O00370 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
O00370 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
O00370 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.25■□□□□ 0.19
O00370 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.25■□□□□ 0.19
O00370 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
O00370 AL645937.2-201ENST00000396808 931 ntBASIC16.25■□□□□ 0.19
O00370 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.25■□□□□ 0.19
O00370 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
O00370 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.25■□□□□ 0.19
O00370 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.25■□□□□ 0.19
O00370 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.25■□□□□ 0.19
O00370 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.25■□□□□ 0.19
O00370 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.25■□□□□ 0.19
O00370 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.25■□□□□ 0.19
O00370 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.25■□□□□ 0.19
O00370 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.25■□□□□ 0.19
O00370 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
O00370 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
O00370 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
O00370 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
O00370 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.25■□□□□ 0.19
O00370 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
O00370 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.25■□□□□ 0.19
O00370 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
O00370 AL360270.3-201ENST00000609118 1348 ntBASIC16.24■□□□□ 0.19
O00370 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.24■□□□□ 0.19
O00370 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.24■□□□□ 0.19
O00370 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.24■□□□□ 0.19
O00370 ZBED1P1-201ENST00000502364 1930 ntBASIC16.24■□□□□ 0.19
O00370 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
O00370 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
O00370 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
O00370 HLA-K-203ENST00000430151 1046 ntBASIC16.24■□□□□ 0.19
O00370 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.24■□□□□ 0.19
O00370 RN7SL752P-201ENST00000463779 287 ntBASIC16.24■□□□□ 0.19
O00370 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
O00370 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
O00370 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
O00370 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
O00370 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.24■□□□□ 0.19
O00370 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
O00370 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
O00370 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
O00370 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
O00370 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.24■□□□□ 0.19
O00370 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
O00370 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.24■□□□□ 0.19
O00370 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
O00370 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.24■□□□□ 0.19
O00370 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.24■□□□□ 0.19
O00370 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
O00370 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
O00370 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
O00370 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
O00370 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
O00370 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.24■□□□□ 0.19
O00370 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
O00370 AC067930.6-201ENST00000623257 4947 ntBASIC16.23■□□□□ 0.19
O00370 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
O00370 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
O00370 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
O00370 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
O00370 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
O00370 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
O00370 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
O00370 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
O00370 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.23■□□□□ 0.19
O00370 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
O00370 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms