Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TEX13D-201ENST00000632372 4203 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 SFPQ-201ENST00000357214 3747 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
CHKB-CPT1BH3BT56 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 BCL2L11-223ENST00000622612 4995 ntTSL 5 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 ZNF423-203ENST00000561648 7907 ntAPPRIS P3 TSL 5 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 DSTYK-202ENST00000367162 7874 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 LSINCT5-201ENST00000626215 2647 ntBASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 NAV2-201ENST00000349880 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 RHBDL3-201ENST00000269051 4661 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 ARSJ-201ENST00000315366 4657 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 AC020658.7-201ENST00000624274 2442 ntBASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 CLIP1-209ENST00000537178 5229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 AL583810.2-201ENST00000556430 3254 ntBASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 ZAN-205ENST00000613979 8669 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 AC034268.1-201ENST00000441047 882 ntBASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 UBE2SP1-201ENST00000450587 669 ntBASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 PON3-205ENST00000451904 1053 ntTSL 3 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 B3GAT3P1-201ENST00000471720 806 ntBASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 STK19B-204ENST00000512515 211 ntBASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 ETFA-216ENST00000560726 942 ntTSL 3 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 MARS-234ENST00000630571 216 ntTSL 5 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 MARS-235ENST00000630803 183 ntTSL 3 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 MAMLD1-201ENST00000262858 4607 ntAPPRIS P3 TSL 5 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CHKB-CPT1BH3BT56 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
CHKB-CPT1BH3BT56 GZF1-201ENST00000338121 4835 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
CHKB-CPT1BH3BT56 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
CHKB-CPT1BH3BT56 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC8.4□□□□□ -1.07
CHKB-CPT1BH3BT56 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
CHKB-CPT1BH3BT56 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
CHKB-CPT1BH3BT56 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC8.4□□□□□ -1.07
CHKB-CPT1BH3BT56 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC8.4□□□□□ -1.07
CHKB-CPT1BH3BT56 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.07
CHKB-CPT1BH3BT56 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
CHKB-CPT1BH3BT56 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
CHKB-CPT1BH3BT56 WIPF1-204ENST00000392547 4587 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
CHKB-CPT1BH3BT56 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.07
CHKB-CPT1BH3BT56 SYNE1-204ENST00000367248 7165 ntTSL 5 BASIC8.4□□□□□ -1.07
CHKB-CPT1BH3BT56 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
CHKB-CPT1BH3BT56 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC8.4□□□□□ -1.07
CHKB-CPT1BH3BT56 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.07
CHKB-CPT1BH3BT56 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 AL031731.1-201ENST00000642131 2094 ntBASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CHKB-CPT1BH3BT56 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms