Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 CHCHD2P3-201ENST00000603038 451 ntBASIC18.7■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AC093726.1-201ENST00000608064 963 ntBASIC18.7■□□□□ 0.58
TRIM6-TRIM34B2RNG4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TRIM6-TRIM34B2RNG4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM6-TRIM34B2RNG4 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM6-TRIM34B2RNG4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM6-TRIM34B2RNG4 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM6-TRIM34B2RNG4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM6-TRIM34B2RNG4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM6-TRIM34B2RNG4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TRIM6-TRIM34B2RNG4 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AC013726.1-201ENST00000563747 2285 ntBASIC18.7■□□□□ 0.58
TRIM6-TRIM34B2RNG4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AL138799.1-201ENST00000448213 1675 ntBASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 FGD5P1-202ENST00000614866 2498 ntBASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AC098850.1-201ENST00000419919 790 ntBASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 FAM207CP-201ENST00000443486 507 ntBASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 RPL13AP25-201ENST00000484130 612 ntBASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 MIR4745-201ENST00000577608 62 ntBASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 BRI3BPP1-201ENST00000594224 787 ntBASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AC099568.2-201ENST00000609194 695 ntBASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM6-TRIM34B2RNG4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 INTS4P2-202ENST00000614726 2019 ntBASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AC134915.1-201ENST00000426461 574 ntBASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AC092364.2-202ENST00000597012 1073 ntBASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM6-TRIM34B2RNG4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms