Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TMEM235A6NFC5 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 AC007787.1-201ENST00000588095 1583 ntBASIC13.07□□□□□ -0.32
TMEM235A6NFC5 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 AC015802.1-201ENST00000588104 1449 ntBASIC13.07□□□□□ -0.32
TMEM235A6NFC5 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 HIST3H2BA-201ENST00000436555 524 ntBASIC13.07□□□□□ -0.32
TMEM235A6NFC5 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 RNA5SP416-201ENST00000516838 111 ntBASIC13.07□□□□□ -0.32
TMEM235A6NFC5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 AC106730.1-201ENST00000566722 1090 ntBASIC13.07□□□□□ -0.32
TMEM235A6NFC5 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 AC026120.1-201ENST00000611536 926 ntBASIC13.07□□□□□ -0.32
TMEM235A6NFC5 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
TMEM235A6NFC5 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 FO393414.2-201ENST00000405153 598 ntBASIC13.06□□□□□ -0.32
TMEM235A6NFC5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 AL353705.2-201ENST00000428243 662 ntBASIC13.06□□□□□ -0.32
TMEM235A6NFC5 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 RPL13AP23-201ENST00000480739 586 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms