Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 AC022144.1-201ENST00000602255 1580 ntBASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 GSN-215ENST00000545652 2428 ntTSL 2 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 TOMM22P5-201ENST00000416399 439 ntBASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 FAM8A3P-201ENST00000427218 844 ntBASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 AC025181.2-201ENST00000606994 802 ntBASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 WASH3P-207ENST00000560956 1394 ntBASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 TP73-209ENST00000603362 1668 ntTSL 5 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 PMS2P2-201ENST00000425039 1128 ntBASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 HNRNPA1P40-201ENST00000426371 1278 ntBASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 AC114501.2-201ENST00000439631 535 ntBASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 AC092183.1-201ENST00000469884 875 ntBASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 MEIS3P1-201ENST00000495167 958 ntBASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 TBCB-211ENST00000589996 724 ntTSL 3 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms