Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 MEP1AP4-201ENST00000423244 1087 ntBASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 RNA5SP421-201ENST00000516864 134 ntBASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 RARRES2P5-201ENST00000564013 466 ntBASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 AC036164.1-201ENST00000570544 333 ntBASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 AL391069.4-201ENST00000609583 481 ntBASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA11Q9Y5H2 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.83□□□□□ -0.03
PCDHGA11Q9Y5H2 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.83□□□□□ -0.03
PCDHGA11Q9Y5H2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGA11Q9Y5H2 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGA11Q9Y5H2 REXO1L2P-201ENST00000425429 2069 ntBASIC14.83□□□□□ -0.03
PCDHGA11Q9Y5H2 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGA11Q9Y5H2 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGA11Q9Y5H2 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGA11Q9Y5H2 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 AP000845.1-201ENST00000581677 2131 ntBASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA11Q9Y5H2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms