Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC015818.8-201ENST00000587907 1519 ntBASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 GOLGA2P4-201ENST00000441462 777 ntBASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 RPSAP36-202ENST00000494591 1261 ntBASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 AC132192.2-201ENST00000596206 1147 ntBASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 AC244157.2-201ENST00000616239 1006 ntBASIC20.21■□□□□ 0.83
NPC1L1Q9UHC9 SHC1P1-201ENST00000425230 1745 ntBASIC20.2■□□□□ 0.83
NPC1L1Q9UHC9 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 AC100850.1-201ENST00000506768 649 ntBASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 AC010328.2-201ENST00000597698 1111 ntBASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 KLK11-210ENST00000600362 759 ntTSL 3 BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NPC1L1Q9UHC9 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 MIR326-201ENST00000362220 95 ntBASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 Z93015.1-201ENST00000451718 390 ntBASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 RN7SL560P-201ENST00000577943 264 ntBASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 KLK3-211ENST00000597483 810 ntTSL 2 BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPC1L1Q9UHC9 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 KHSRPP1-201ENST00000427983 1768 ntBASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 MPI-203ENST00000535694 1523 ntTSL 2 BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms