Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 AC068587.6-202ENST00000641839 5619 ntBASIC14.35□□□□□ -0.11
CTSFQ9UBX1 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 AC006001.1-201ENST00000325130 474 ntBASIC14.35□□□□□ -0.11
CTSFQ9UBX1 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 GHSR-202ENST00000427970 912 ntBASIC14.35□□□□□ -0.11
CTSFQ9UBX1 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 RNA5SP412-201ENST00000516234 123 ntBASIC14.35□□□□□ -0.11
CTSFQ9UBX1 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 RN7SL48P-201ENST00000579283 293 ntBASIC14.35□□□□□ -0.11
CTSFQ9UBX1 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 AC008687.7-202ENST00000637404 953 ntBASIC14.35□□□□□ -0.11
CTSFQ9UBX1 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 REXO1L4P-201ENST00000605109 1937 ntBASIC14.35□□□□□ -0.11
CTSFQ9UBX1 AC104640.1-201ENST00000562617 2109 ntBASIC14.35□□□□□ -0.11
CTSFQ9UBX1 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.35□□□□□ -0.11
CTSFQ9UBX1 C18orf15-201ENST00000623680 2534 ntBASIC14.35□□□□□ -0.11
CTSFQ9UBX1 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.34□□□□□ -0.11
CTSFQ9UBX1 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 AC010328.2-201ENST00000597698 1111 ntBASIC14.34□□□□□ -0.11
CTSFQ9UBX1 MIR6799-201ENST00000620297 69 ntBASIC14.34□□□□□ -0.11
CTSFQ9UBX1 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 SSR4P1-203ENST00000599569 2260 ntBASIC14.34□□□□□ -0.11
CTSFQ9UBX1 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSFQ9UBX1 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CTSFQ9UBX1 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms