Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.72□□□□□ -0.05
LRTM1Q9HBL6 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 AC018442.1-201ENST00000421439 2061 ntBASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 TREML5P-201ENST00000421694 576 ntBASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 FAM86GP-201ENST00000448322 971 ntBASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 AC097493.3-201ENST00000509725 367 ntBASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 AC092337.1-201ENST00000568699 1129 ntBASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 AC100757.3-201ENST00000622361 1406 ntBASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.71□□□□□ -0.05
LRTM1Q9HBL6 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
LRTM1Q9HBL6 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LRTM1Q9HBL6 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.71□□□□□ -0.06
LRTM1Q9HBL6 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.71□□□□□ -0.06
LRTM1Q9HBL6 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
LRTM1Q9HBL6 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
LRTM1Q9HBL6 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 AC114501.2-201ENST00000439631 535 ntBASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 AC004066.1-201ENST00000502488 802 ntBASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 AC093028.1-201ENST00000622998 982 ntBASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 AL590560.3-201ENST00000623350 461 ntBASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRTM1Q9HBL6 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms