Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 RN7SL618P-201ENST00000477850 296 ntBASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 SDHAP3-202ENST00000515467 728 ntBASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 AC025181.2-201ENST00000606994 802 ntBASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 AC087386.2-201ENST00000623212 4637 ntBASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J2Q9GZM3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 CICP14-201ENST00000629111 2732 ntBASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 AC041040.2-201ENST00000622926 2899 ntBASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 CNN2P11-201ENST00000429351 262 ntBASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J2Q9GZM3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 AL121723.1-201ENST00000445194 1519 ntBASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 LINC01230-201ENST00000625222 3017 ntBASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms