Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 AC007967.4-201ENST00000614700 386 ntBASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
AMBRA1Q9C0C7 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 FAM86GP-201ENST00000448322 971 ntBASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 AC015910.1-201ENST00000579400 975 ntBASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 AL096865.1-201ENST00000606796 927 ntBASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms