Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 HADH-202ENST00000403312 1752 ntTSL 5 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 GGCT-205ENST00000409436 954 ntTSL 3 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 PMS2P4-201ENST00000412466 1052 ntBASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 AL645728.2-201ENST00000641974 660 ntBASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
NDUFAF3Q9BU61 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 AC012569.1-201ENST00000591191 1524 ntBASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 KRT18P28-201ENST00000453838 1332 ntBASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 AC091812.2-201ENST00000619081 385 ntBASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms