Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 AC016397.2-201ENST00000624848 1985 ntBASIC12.96□□□□□ -0.34
SEC22CQ9BRL7 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
SEC22CQ9BRL7 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
SEC22CQ9BRL7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SEC22CQ9BRL7 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
SEC22CQ9BRL7 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
SEC22CQ9BRL7 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SEC22CQ9BRL7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
SEC22CQ9BRL7 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SEC22CQ9BRL7 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
SEC22CQ9BRL7 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 AL031595.1-201ENST00000623969 4709 ntBASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 LAGE3P1-201ENST00000425356 484 ntBASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 PRYP6-201ENST00000514804 343 ntBASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 HNRNPUP1-201ENST00000554987 333 ntBASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 AC025062.2-201ENST00000605477 670 ntBASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 AL732292.2-201ENST00000609649 430 ntBASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 AL645728.2-201ENST00000641974 660 ntBASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 AL591122.2-201ENST00000624125 1853 ntBASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SEC22CQ9BRL7 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 MRPL20P1-201ENST00000400819 433 ntBASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 IGHV3-65-201ENST00000523210 341 ntBASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 MIR3180-1-201ENST00000580374 94 ntBASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 MIR3180-3-201ENST00000584616 94 ntBASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms