Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNX18Q96RF0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SNX18Q96RF0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNX18Q96RF0 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNX18Q96RF0 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SNX18Q96RF0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNX18Q96RF0 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNX18Q96RF0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SNX18Q96RF0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNX18Q96RF0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 SPDYE7P-202ENST00000420373 878 ntBASIC13.99□□□□□ -0.17
SNX18Q96RF0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 BCRP1-201ENST00000444246 691 ntBASIC13.99□□□□□ -0.17
SNX18Q96RF0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SNX18Q96RF0 AC093214.1-201ENST00000511688 1107 ntBASIC13.99□□□□□ -0.17
SNX18Q96RF0 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 DUX4L27-201ENST00000554796 1261 ntBASIC13.99□□□□□ -0.17
SNX18Q96RF0 AC003101.2-201ENST00000612557 442 ntBASIC13.99□□□□□ -0.17
SNX18Q96RF0 AP001059.3-201ENST00000619053 235 ntBASIC13.99□□□□□ -0.17
SNX18Q96RF0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SNX18Q96RF0 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SNX18Q96RF0 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNX18Q96RF0 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNX18Q96RF0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNX18Q96RF0 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 AC084364.1-201ENST00000551967 1556 ntBASIC13.99□□□□□ -0.17
SNX18Q96RF0 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNX18Q96RF0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.99□□□□□ -0.17
SNX18Q96RF0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SNX18Q96RF0 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 AL928921.2-201ENST00000641325 2442 ntBASIC13.99□□□□□ -0.17
SNX18Q96RF0 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 AL512356.2-201ENST00000546955 174 ntBASIC13.98□□□□□ -0.17
SNX18Q96RF0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 AL096865.1-201ENST00000606796 927 ntBASIC13.98□□□□□ -0.17
SNX18Q96RF0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.98□□□□□ -0.17
SNX18Q96RF0 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNX18Q96RF0 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms