Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
GAFA1Q96PS6 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 EIF3FP3-201ENST00000434851 1086 ntBASIC12.66□□□□□ -0.38
GAFA1Q96PS6 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 GIMAP3P-201ENST00000495150 836 ntBASIC12.66□□□□□ -0.38
GAFA1Q96PS6 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 USP32P1-208ENST00000506594 1164 ntBASIC12.66□□□□□ -0.38
GAFA1Q96PS6 AP001889.1-201ENST00000525414 633 ntBASIC12.66□□□□□ -0.38
GAFA1Q96PS6 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 DUX4L47-201ENST00000566374 394 ntBASIC12.66□□□□□ -0.38
GAFA1Q96PS6 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 AC055811.4-201ENST00000624039 1754 ntBASIC12.66□□□□□ -0.38
GAFA1Q96PS6 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.66□□□□□ -0.38
GAFA1Q96PS6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
GAFA1Q96PS6 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.65□□□□□ -0.38
GAFA1Q96PS6 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GAFA1Q96PS6 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GAFA1Q96PS6 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.65□□□□□ -0.38
GAFA1Q96PS6 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
GAFA1Q96PS6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GAFA1Q96PS6 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GAFA1Q96PS6 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.65□□□□□ -0.38
GAFA1Q96PS6 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.65□□□□□ -0.38
GAFA1Q96PS6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GAFA1Q96PS6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
GAFA1Q96PS6 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
GAFA1Q96PS6 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GAFA1Q96PS6 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
GAFA1Q96PS6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GAFA1Q96PS6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.65□□□□□ -0.38
GAFA1Q96PS6 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
GAFA1Q96PS6 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GAFA1Q96PS6 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GAFA1Q96PS6 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.65□□□□□ -0.38
GAFA1Q96PS6 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
GAFA1Q96PS6 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.65□□□□□ -0.38
GAFA1Q96PS6 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms