Protein–RNA interactions for Protein: Q969T3

SNX21, Sorting nexin-21, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21Q969T3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SNX21Q969T3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX21Q969T3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.04■□□□□ 0.48
SNX21Q969T3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC18.04■□□□□ 0.48
SNX21Q969T3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SNX21Q969T3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNX21Q969T3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC18.04■□□□□ 0.48
SNX21Q969T3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX21Q969T3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX21Q969T3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX21Q969T3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
SNX21Q969T3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX21Q969T3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.04■□□□□ 0.48
SNX21Q969T3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.04■□□□□ 0.48
SNX21Q969T3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.04■□□□□ 0.48
SNX21Q969T3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNX21Q969T3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
SNX21Q969T3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
SNX21Q969T3 AC009093.7-201ENST00000623853 1223 ntBASIC18.04■□□□□ 0.48
SNX21Q969T3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX21Q969T3 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX21Q969T3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC18.04■□□□□ 0.48
SNX21Q969T3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNX21Q969T3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX21Q969T3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNX21Q969T3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC18.04■□□□□ 0.48
SNX21Q969T3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX21Q969T3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX21Q969T3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX21Q969T3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX21Q969T3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX21Q969T3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNX21Q969T3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX21Q969T3 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX21Q969T3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SNX21Q969T3 AL137783.1-201ENST00000623494 1896 ntBASIC18.03■□□□□ 0.48
SNX21Q969T3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SNX21Q969T3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNX21Q969T3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX21Q969T3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX21Q969T3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SNX21Q969T3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNX21Q969T3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.03■□□□□ 0.48
SNX21Q969T3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.03■□□□□ 0.48
SNX21Q969T3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SNX21Q969T3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC18.03■□□□□ 0.48
SNX21Q969T3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.03■□□□□ 0.48
SNX21Q969T3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNX21Q969T3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.03■□□□□ 0.48
SNX21Q969T3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX21Q969T3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC18.03■□□□□ 0.48
SNX21Q969T3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC18.03■□□□□ 0.48
SNX21Q969T3 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNX21Q969T3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC18.03■□□□□ 0.48
SNX21Q969T3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNX21Q969T3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SNX21Q969T3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SNX21Q969T3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.03■□□□□ 0.48
SNX21Q969T3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX21Q969T3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
SNX21Q969T3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX21Q969T3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC18.03■□□□□ 0.48
SNX21Q969T3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNX21Q969T3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SNX21Q969T3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC18.02■□□□□ 0.48
SNX21Q969T3 AC093525.8-201ENST00000624099 1342 ntBASIC18.02■□□□□ 0.48
SNX21Q969T3 APP-205ENST00000358918 2366 ntTSL 5 BASIC18.02■□□□□ 0.48
SNX21Q969T3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SNX21Q969T3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNX21Q969T3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNX21Q969T3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNX21Q969T3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.02■□□□□ 0.48
SNX21Q969T3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.02■□□□□ 0.48
SNX21Q969T3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.02■□□□□ 0.48
SNX21Q969T3 YBX1P5-201ENST00000509441 847 ntBASIC18.02■□□□□ 0.48
SNX21Q969T3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.02■□□□□ 0.48
SNX21Q969T3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.02■□□□□ 0.48
SNX21Q969T3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
SNX21Q969T3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
SNX21Q969T3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.02■□□□□ 0.48
SNX21Q969T3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.02■□□□□ 0.48
SNX21Q969T3 AP001059.3-201ENST00000619053 235 ntBASIC18.02■□□□□ 0.48
SNX21Q969T3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SNX21Q969T3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.02■□□□□ 0.48
SNX21Q969T3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNX21Q969T3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNX21Q969T3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SNX21Q969T3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SNX21Q969T3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.02■□□□□ 0.47
SNX21Q969T3 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SNX21Q969T3 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC18.01■□□□□ 0.47
SNX21Q969T3 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX21Q969T3 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX21Q969T3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.01■□□□□ 0.47
SNX21Q969T3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX21Q969T3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX21Q969T3 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX21Q969T3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNX21Q969T3 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC18.01■□□□□ 0.47
SNX21Q969T3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms