Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 Z92544.3-201ENST00000624747 417 ntBASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTN4IP1Q8WWV3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 AC041040.2-201ENST00000622926 2899 ntBASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 AC084364.1-201ENST00000551967 1556 ntBASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 CETN4P-206ENST00000642099 2168 ntBASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 AC006504.5-208ENST00000588784 2401 ntBASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 KRT8P12-202ENST00000472924 1397 ntBASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTN4IP1Q8WWV3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 PTENP1-202ENST00000532280 3996 ntBASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms