Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 AP000344.2-201ENST00000512987 629 ntBASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 AC018529.2-202ENST00000611482 3087 ntBASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 AL627223.1-201ENST00000416693 442 ntBASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 AC007967.4-201ENST00000614700 386 ntBASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 AC027601.5-201ENST00000624065 2482 ntBASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.5□□□□□ -0.25
DNAAF1Q8NEP3 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.49□□□□□ -0.25
DNAAF1Q8NEP3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DNAAF1Q8NEP3 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DNAAF1Q8NEP3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms