Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 AL691432.1-201ENST00000596308 1422 ntBASIC12.74□□□□□ -0.37
ZNF546Q86UE3 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 AL121772.3-201ENST00000610840 674 ntBASIC12.74□□□□□ -0.37
ZNF546Q86UE3 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
ZNF546Q86UE3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 AC136632.2-201ENST00000512891 861 ntBASIC12.73□□□□□ -0.37
ZNF546Q86UE3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 AC025062.2-201ENST00000605477 670 ntBASIC12.73□□□□□ -0.37
ZNF546Q86UE3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF546Q86UE3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms