Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.86□□□□□ -0.19
SHFQ7M4L6 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SHFQ7M4L6 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SHFQ7M4L6 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.86□□□□□ -0.19
SHFQ7M4L6 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.86□□□□□ -0.19
SHFQ7M4L6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
SHFQ7M4L6 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SHFQ7M4L6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.86□□□□□ -0.19
SHFQ7M4L6 AL022342.1-201ENST00000400363 863 ntBASIC13.86□□□□□ -0.19
SHFQ7M4L6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.86□□□□□ -0.19
SHFQ7M4L6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.86□□□□□ -0.19
SHFQ7M4L6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.86□□□□□ -0.19
SHFQ7M4L6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.86□□□□□ -0.19
SHFQ7M4L6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.86□□□□□ -0.19
SHFQ7M4L6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
SHFQ7M4L6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 AL513210.1-201ENST00000629608 234 ntBASIC13.86□□□□□ -0.19
SHFQ7M4L6 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.86□□□□□ -0.19
SHFQ7M4L6 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
SHFQ7M4L6 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.86□□□□□ -0.19
SHFQ7M4L6 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.86□□□□□ -0.19
SHFQ7M4L6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SHFQ7M4L6 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHFQ7M4L6 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHFQ7M4L6 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SHFQ7M4L6 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.85□□□□□ -0.19
SHFQ7M4L6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.85□□□□□ -0.19
SHFQ7M4L6 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHFQ7M4L6 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.85□□□□□ -0.19
SHFQ7M4L6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SHFQ7M4L6 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHFQ7M4L6 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHFQ7M4L6 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHFQ7M4L6 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHFQ7M4L6 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHFQ7M4L6 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SHFQ7M4L6 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SHFQ7M4L6 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SHFQ7M4L6 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.85□□□□□ -0.19
SHFQ7M4L6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHFQ7M4L6 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.85□□□□□ -0.19
SHFQ7M4L6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SHFQ7M4L6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.85□□□□□ -0.19
SHFQ7M4L6 AL627223.1-201ENST00000416693 442 ntBASIC13.85□□□□□ -0.19
SHFQ7M4L6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.85□□□□□ -0.19
SHFQ7M4L6 GHSR-202ENST00000427970 912 ntBASIC13.85□□□□□ -0.19
SHFQ7M4L6 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.85□□□□□ -0.19
SHFQ7M4L6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.85□□□□□ -0.19
SHFQ7M4L6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.85□□□□□ -0.19
SHFQ7M4L6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.85□□□□□ -0.19
SHFQ7M4L6 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SHFQ7M4L6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.85□□□□□ -0.19
SHFQ7M4L6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.85□□□□□ -0.19
SHFQ7M4L6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.85□□□□□ -0.19
SHFQ7M4L6 AC011467.4-201ENST00000594891 528 ntBASIC13.85□□□□□ -0.19
SHFQ7M4L6 RN7SL828P-201ENST00000607615 303 ntBASIC13.85□□□□□ -0.19
SHFQ7M4L6 AC007967.4-201ENST00000614700 386 ntBASIC13.85□□□□□ -0.19
SHFQ7M4L6 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHFQ7M4L6 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SHFQ7M4L6 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SHFQ7M4L6 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SHFQ7M4L6 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHFQ7M4L6 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHFQ7M4L6 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHFQ7M4L6 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
SHFQ7M4L6 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHFQ7M4L6 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHFQ7M4L6 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SHFQ7M4L6 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHFQ7M4L6 KRT8P12-202ENST00000472924 1397 ntBASIC13.84□□□□□ -0.19
SHFQ7M4L6 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SHFQ7M4L6 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 HSPA7-201ENST00000445535 1927 ntBASIC13.84□□□□□ -0.19
SHFQ7M4L6 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms