Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CBWD3Q5JTY5 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBWD3Q5JTY5 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CBWD3Q5JTY5 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.45■□□□□ 0.22
CBWD3Q5JTY5 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
CBWD3Q5JTY5 AC023908.3-201ENST00000564211 3047 ntBASIC16.45■□□□□ 0.22
CBWD3Q5JTY5 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.45■□□□□ 0.22
CBWD3Q5JTY5 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBWD3Q5JTY5 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CBWD3Q5JTY5 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CBWD3Q5JTY5 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBWD3Q5JTY5 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 NORAD-201ENST00000565493 5339 ntBASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 AC140479.7-201ENST00000636301 2332 ntBASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 KLF2P2-201ENST00000416807 1039 ntBASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 RPSAP52-203ENST00000622976 1023 ntBASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CBWD3Q5JTY5 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 MSTO2P-201ENST00000314835 1709 ntBASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 DUX4L47-201ENST00000566374 394 ntBASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 AC138761.1-201ENST00000584393 385 ntBASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 AC092364.2-202ENST00000597012 1073 ntBASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 CU634019.7-201ENST00000624153 1185 ntBASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 FP236241.2-201ENST00000624906 1185 ntBASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.43■□□□□ 0.22
CBWD3Q5JTY5 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms