Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 AC022616.1-201ENST00000518688 554 ntBASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO1Q2MKA7 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.15□□□□□ -0.31
RSPO1Q2MKA7 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 MSTO2P-201ENST00000314835 1709 ntBASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 GIMAP3P-201ENST00000495150 836 ntBASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 TERF1P3-201ENST00000505638 1227 ntBASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 AP001063.1-201ENST00000568332 529 ntBASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 AC004466.1-201ENST00000599515 1080 ntBASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 CU634019.7-201ENST00000624153 1185 ntBASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 FP236241.2-201ENST00000624906 1185 ntBASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 AL033527.5-201ENST00000641382 801 ntBASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RSPO1Q2MKA7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms