Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 FAM8A4P-201ENST00000435433 1213 ntBASIC14.94□□□□□ -0.02
CDK3Q00526 AL355994.2-201ENST00000447882 704 ntBASIC14.94□□□□□ -0.02
CDK3Q00526 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK3Q00526 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.94□□□□□ -0.02
CDK3Q00526 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.94□□□□□ -0.02
CDK3Q00526 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.94□□□□□ -0.02
CDK3Q00526 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CDK3Q00526 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.94□□□□□ -0.02
CDK3Q00526 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.94□□□□□ -0.02
CDK3Q00526 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK3Q00526 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK3Q00526 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.94□□□□□ -0.02
CDK3Q00526 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK3Q00526 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.94□□□□□ -0.02
CDK3Q00526 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK3Q00526 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK3Q00526 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.94□□□□□ -0.02
CDK3Q00526 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CDK3Q00526 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CDK3Q00526 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK3Q00526 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CDK3Q00526 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CDK3Q00526 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDK3Q00526 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.94□□□□□ -0.02
CDK3Q00526 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CDK3Q00526 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.93□□□□□ -0.02
CDK3Q00526 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CDK3Q00526 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CDK3Q00526 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.93□□□□□ -0.02
CDK3Q00526 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.93□□□□□ -0.02
CDK3Q00526 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CDK3Q00526 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.93□□□□□ -0.02
CDK3Q00526 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.93□□□□□ -0.02
CDK3Q00526 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.93□□□□□ -0.02
CDK3Q00526 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.93□□□□□ -0.02
CDK3Q00526 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CDK3Q00526 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.93□□□□□ -0.02
CDK3Q00526 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CDK3Q00526 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.93□□□□□ -0.02
CDK3Q00526 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.93□□□□□ -0.02
CDK3Q00526 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.93□□□□□ -0.02
CDK3Q00526 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.93□□□□□ -0.02
CDK3Q00526 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CDK3Q00526 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 AC013268.4-201ENST00000637413 2228 ntBASIC14.93□□□□□ -0.02
CDK3Q00526 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CDK3Q00526 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDK3Q00526 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDK3Q00526 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDK3Q00526 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CDK3Q00526 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDK3Q00526 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDK3Q00526 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDK3Q00526 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CDK3Q00526 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.92□□□□□ -0.02
CDK3Q00526 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDK3Q00526 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDK3Q00526 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDK3Q00526 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDK3Q00526 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDK3Q00526 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDK3Q00526 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDK3Q00526 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDK3Q00526 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDK3Q00526 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDK3Q00526 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDK3Q00526 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDK3Q00526 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDK3Q00526 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDK3Q00526 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.92□□□□□ -0.02
CDK3Q00526 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.92□□□□□ -0.02
CDK3Q00526 AC092658.1-201ENST00000505836 891 ntBASIC14.92□□□□□ -0.02
CDK3Q00526 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.92□□□□□ -0.02
CDK3Q00526 AC106820.3-201ENST00000561653 397 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms