Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RPS3AP61247 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RPS3AP61247 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS3AP61247 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.41□□□□□ -0.1
RPS3AP61247 PTENP1-202ENST00000532280 3996 ntBASIC14.41□□□□□ -0.1
RPS3AP61247 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS3AP61247 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS3AP61247 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS3AP61247 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RPS3AP61247 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RPS3AP61247 FO393414.2-201ENST00000405153 598 ntBASIC14.41□□□□□ -0.1
RPS3AP61247 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.41□□□□□ -0.1
RPS3AP61247 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RPS3AP61247 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RPS3AP61247 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.41□□□□□ -0.1
RPS3AP61247 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.41□□□□□ -0.1
RPS3AP61247 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.41□□□□□ -0.1
RPS3AP61247 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.41□□□□□ -0.1
RPS3AP61247 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS3AP61247 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.41□□□□□ -0.1
RPS3AP61247 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS3AP61247 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RPS3AP61247 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.41□□□□□ -0.1
RPS3AP61247 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.41□□□□□ -0.1
RPS3AP61247 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.41□□□□□ -0.1
RPS3AP61247 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS3AP61247 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS3AP61247 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.41□□□□□ -0.1
RPS3AP61247 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.41□□□□□ -0.1
RPS3AP61247 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RPS3AP61247 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RPS3AP61247 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS3AP61247 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RPS3AP61247 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.41□□□□□ -0.1
RPS3AP61247 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RPS3AP61247 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RPS3AP61247 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
RPS3AP61247 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS3AP61247 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
RPS3AP61247 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS3AP61247 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.41□□□□□ -0.1
RPS3AP61247 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.41□□□□□ -0.1
RPS3AP61247 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS3AP61247 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
RPS3AP61247 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RPS3AP61247 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.41□□□□□ -0.1
RPS3AP61247 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RPS3AP61247 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.41□□□□□ -0.1
RPS3AP61247 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RPS3AP61247 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.4□□□□□ -0.1
RPS3AP61247 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS3AP61247 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
RPS3AP61247 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS3AP61247 AC136759.1-202ENST00000530858 2194 ntBASIC14.4□□□□□ -0.1
RPS3AP61247 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS3AP61247 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS3AP61247 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.4□□□□□ -0.1
RPS3AP61247 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.4□□□□□ -0.1
RPS3AP61247 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.4□□□□□ -0.1
RPS3AP61247 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.4□□□□□ -0.1
RPS3AP61247 AC022144.1-201ENST00000602255 1580 ntBASIC14.4□□□□□ -0.1
RPS3AP61247 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.4□□□□□ -0.1
RPS3AP61247 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS3AP61247 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS3AP61247 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS3AP61247 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS3AP61247 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RPS3AP61247 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.4□□□□□ -0.1
RPS3AP61247 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RPS3AP61247 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.4□□□□□ -0.1
RPS3AP61247 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS3AP61247 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RPS3AP61247 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.4□□□□□ -0.1
RPS3AP61247 AC004890.2-204ENST00000481968 304 ntBASIC14.4□□□□□ -0.1
RPS3AP61247 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.4□□□□□ -0.1
RPS3AP61247 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.4□□□□□ -0.1
RPS3AP61247 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.4□□□□□ -0.1
RPS3AP61247 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.4□□□□□ -0.1
RPS3AP61247 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.4□□□□□ -0.1
RPS3AP61247 AL033527.5-202ENST00000641632 1098 ntBASIC14.4□□□□□ -0.1
RPS3AP61247 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS3AP61247 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS3AP61247 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.4□□□□□ -0.1
RPS3AP61247 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RPS3AP61247 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RPS3AP61247 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RPS3AP61247 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RPS3AP61247 AL136982.4-201ENST00000437689 1740 ntBASIC14.4□□□□□ -0.1
RPS3AP61247 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS3AP61247 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS3AP61247 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.4□□□□□ -0.1
RPS3AP61247 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS3AP61247 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS3AP61247 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RPS3AP61247 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RPS3AP61247 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.4□□□□□ -0.1
RPS3AP61247 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RPS3AP61247 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.11
RPS3AP61247 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPS3AP61247 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms