Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRPF1P55201 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRPF1P55201 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRPF1P55201 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BRPF1P55201 AC018442.1-201ENST00000421439 2061 ntBASIC19.37■□□□□ 0.69
BRPF1P55201 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRPF1P55201 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BRPF1P55201 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRPF1P55201 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC19.36■□□□□ 0.69
BRPF1P55201 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC19.36■□□□□ 0.69
BRPF1P55201 OVCH1-AS1-204ENST00000641955 5529 ntBASIC19.36■□□□□ 0.69
BRPF1P55201 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC19.36■□□□□ 0.69
BRPF1P55201 SF1-209ENST00000433274 2317 ntTSL 2 BASIC19.36■□□□□ 0.69
BRPF1P55201 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.36■□□□□ 0.69
BRPF1P55201 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRPF1P55201 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BRPF1P55201 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC19.36■□□□□ 0.69
BRPF1P55201 AL390755.1-201ENST00000623716 2027 ntBASIC19.36■□□□□ 0.69
BRPF1P55201 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRPF1P55201 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRPF1P55201 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
BRPF1P55201 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
BRPF1P55201 APOC3-202ENST00000375345 604 ntTSL 5 BASIC19.36■□□□□ 0.69
BRPF1P55201 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
BRPF1P55201 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRPF1P55201 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC19.36■□□□□ 0.69
BRPF1P55201 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC19.36■□□□□ 0.69
BRPF1P55201 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.36■□□□□ 0.69
BRPF1P55201 AL355994.2-201ENST00000447882 704 ntBASIC19.36■□□□□ 0.69
BRPF1P55201 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19.36■□□□□ 0.69
BRPF1P55201 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC19.36■□□□□ 0.69
BRPF1P55201 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
BRPF1P55201 USP32P1-208ENST00000506594 1164 ntBASIC19.36■□□□□ 0.69
BRPF1P55201 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
BRPF1P55201 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BRPF1P55201 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
BRPF1P55201 GNRHR2-203ENST00000581100 1187 ntBASIC19.36■□□□□ 0.69
BRPF1P55201 RN7SL190P-201ENST00000582519 257 ntBASIC19.36■□□□□ 0.69
BRPF1P55201 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BRPF1P55201 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRPF1P55201 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC19.36■□□□□ 0.69
BRPF1P55201 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BRPF1P55201 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
BRPF1P55201 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
BRPF1P55201 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
BRPF1P55201 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BRPF1P55201 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BRPF1P55201 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
BRPF1P55201 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC19.35■□□□□ 0.69
BRPF1P55201 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC19.35■□□□□ 0.69
BRPF1P55201 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRPF1P55201 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRPF1P55201 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC19.35■□□□□ 0.69
BRPF1P55201 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRPF1P55201 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRPF1P55201 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRPF1P55201 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRPF1P55201 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRPF1P55201 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRPF1P55201 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
BRPF1P55201 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRPF1P55201 STX1A-203ENST00000395155 783 ntTSL 2 BASIC19.35■□□□□ 0.69
BRPF1P55201 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC19.35■□□□□ 0.69
BRPF1P55201 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC19.35■□□□□ 0.69
BRPF1P55201 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC19.35■□□□□ 0.69
BRPF1P55201 KRT18P25-201ENST00000508931 1278 ntBASIC19.35■□□□□ 0.69
BRPF1P55201 AP001889.1-201ENST00000525414 633 ntBASIC19.35■□□□□ 0.69
BRPF1P55201 AC068587.3-201ENST00000526613 355 ntBASIC19.35■□□□□ 0.69
BRPF1P55201 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
BRPF1P55201 AC023824.1-201ENST00000562945 2975 ntBASIC19.35■□□□□ 0.69
BRPF1P55201 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRPF1P55201 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC19.35■□□□□ 0.69
BRPF1P55201 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRPF1P55201 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRPF1P55201 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRPF1P55201 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRPF1P55201 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC19.35■□□□□ 0.69
BRPF1P55201 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRPF1P55201 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRPF1P55201 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRPF1P55201 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRPF1P55201 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRPF1P55201 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRPF1P55201 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRPF1P55201 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRPF1P55201 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
BRPF1P55201 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
BRPF1P55201 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRPF1P55201 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
BRPF1P55201 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC19.34■□□□□ 0.69
BRPF1P55201 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BRPF1P55201 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
BRPF1P55201 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRPF1P55201 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
BRPF1P55201 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.34■□□□□ 0.69
BRPF1P55201 TP73-213ENST00000604479 1623 ntTSL 5 BASIC19.34■□□□□ 0.69
BRPF1P55201 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRPF1P55201 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.34■□□□□ 0.69
BRPF1P55201 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
BRPF1P55201 AC005229.1-201ENST00000392885 409 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms