Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H2P55055 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H2P55055 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H2P55055 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H2P55055 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NR1H2P55055 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H2P55055 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NR1H2P55055 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
NR1H2P55055 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H2P55055 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NR1H2P55055 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H2P55055 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NR1H2P55055 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
NR1H2P55055 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
NR1H2P55055 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H2P55055 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
NR1H2P55055 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H2P55055 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H2P55055 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H2P55055 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.57□□□□□ -0.08
NR1H2P55055 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H2P55055 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H2P55055 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.57□□□□□ -0.08
NR1H2P55055 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.57□□□□□ -0.08
NR1H2P55055 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.57□□□□□ -0.08
NR1H2P55055 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H2P55055 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.57□□□□□ -0.08
NR1H2P55055 KRT8P48-201ENST00000515599 1220 ntBASIC14.57□□□□□ -0.08
NR1H2P55055 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.57□□□□□ -0.08
NR1H2P55055 KRT8P23-201ENST00000560090 1207 ntBASIC14.57□□□□□ -0.08
NR1H2P55055 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.57□□□□□ -0.08
NR1H2P55055 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.57□□□□□ -0.08
NR1H2P55055 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.57□□□□□ -0.08
NR1H2P55055 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.57□□□□□ -0.08
NR1H2P55055 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H2P55055 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H2P55055 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.57□□□□□ -0.08
NR1H2P55055 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H2P55055 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.57□□□□□ -0.08
NR1H2P55055 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.57□□□□□ -0.08
NR1H2P55055 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.57□□□□□ -0.08
NR1H2P55055 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H2P55055 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
NR1H2P55055 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NR1H2P55055 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H2P55055 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H2P55055 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H2P55055 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H2P55055 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H2P55055 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NR1H2P55055 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NR1H2P55055 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.56□□□□□ -0.08
NR1H2P55055 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H2P55055 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.56□□□□□ -0.08
NR1H2P55055 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H2P55055 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H2P55055 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H2P55055 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.56□□□□□ -0.08
NR1H2P55055 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H2P55055 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H2P55055 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NR1H2P55055 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H2P55055 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.56□□□□□ -0.08
NR1H2P55055 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.56□□□□□ -0.08
NR1H2P55055 AL035633.1-201ENST00000406139 838 ntBASIC14.56□□□□□ -0.08
NR1H2P55055 PMS2P4-201ENST00000412466 1052 ntBASIC14.56□□□□□ -0.08
NR1H2P55055 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H2P55055 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NR1H2P55055 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H2P55055 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.56□□□□□ -0.08
NR1H2P55055 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H2P55055 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NR1H2P55055 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H2P55055 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NR1H2P55055 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H2P55055 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H2P55055 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
NR1H2P55055 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.56□□□□□ -0.08
NR1H2P55055 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H2P55055 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H2P55055 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NR1H2P55055 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.56□□□□□ -0.08
NR1H2P55055 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H2P55055 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H2P55055 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.56□□□□□ -0.08
NR1H2P55055 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H2P55055 AC005562.1-201ENST00000583030 3219 ntBASIC14.56□□□□□ -0.08
NR1H2P55055 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H2P55055 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H2P55055 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NR1H2P55055 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H2P55055 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
NR1H2P55055 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H2P55055 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
NR1H2P55055 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H2P55055 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.56□□□□□ -0.08
NR1H2P55055 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H2P55055 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H2P55055 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H2P55055 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms