Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.33■□□□□ 0.2
RAD23BP54727 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.33■□□□□ 0.2
RAD23BP54727 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RAD23BP54727 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RAD23BP54727 REXO1L2P-201ENST00000425429 2069 ntBASIC16.33■□□□□ 0.2
RAD23BP54727 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAD23BP54727 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.33■□□□□ 0.2
RAD23BP54727 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAD23BP54727 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAD23BP54727 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAD23BP54727 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RAD23BP54727 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAD23BP54727 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAD23BP54727 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAD23BP54727 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RAD23BP54727 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RAD23BP54727 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAD23BP54727 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
RAD23BP54727 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAD23BP54727 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAD23BP54727 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAD23BP54727 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAD23BP54727 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RAD23BP54727 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.32■□□□□ 0.2
RAD23BP54727 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAD23BP54727 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RAD23BP54727 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.32■□□□□ 0.2
RAD23BP54727 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAD23BP54727 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RAD23BP54727 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RAD23BP54727 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAD23BP54727 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RAD23BP54727 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAD23BP54727 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.32■□□□□ 0.2
RAD23BP54727 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAD23BP54727 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAD23BP54727 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.32■□□□□ 0.2
RAD23BP54727 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAD23BP54727 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.32■□□□□ 0.2
RAD23BP54727 RN7SL837P-201ENST00000463010 287 ntBASIC16.32■□□□□ 0.2
RAD23BP54727 RN7SL752P-201ENST00000463779 287 ntBASIC16.32■□□□□ 0.2
RAD23BP54727 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.32■□□□□ 0.2
RAD23BP54727 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.32■□□□□ 0.2
RAD23BP54727 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RAD23BP54727 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RAD23BP54727 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.32■□□□□ 0.2
RAD23BP54727 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RAD23BP54727 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.32■□□□□ 0.2
RAD23BP54727 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RAD23BP54727 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.32■□□□□ 0.2
RAD23BP54727 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RAD23BP54727 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RAD23BP54727 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
RAD23BP54727 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAD23BP54727 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAD23BP54727 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAD23BP54727 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAD23BP54727 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAD23BP54727 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAD23BP54727 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAD23BP54727 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAD23BP54727 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAD23BP54727 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RAD23BP54727 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAD23BP54727 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAD23BP54727 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAD23BP54727 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAD23BP54727 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.31■□□□□ 0.2
RAD23BP54727 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RAD23BP54727 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RAD23BP54727 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAD23BP54727 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAD23BP54727 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAD23BP54727 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.31■□□□□ 0.2
RAD23BP54727 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.31■□□□□ 0.2
RAD23BP54727 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAD23BP54727 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAD23BP54727 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RAD23BP54727 AL360270.3-201ENST00000609118 1348 ntBASIC16.31■□□□□ 0.2
RAD23BP54727 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAD23BP54727 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAD23BP54727 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.31■□□□□ 0.2
RAD23BP54727 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.31■□□□□ 0.2
RAD23BP54727 AL645937.2-201ENST00000396808 931 ntBASIC16.31■□□□□ 0.2
RAD23BP54727 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.31■□□□□ 0.2
RAD23BP54727 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAD23BP54727 COX5BP8-201ENST00000416911 349 ntBASIC16.31■□□□□ 0.2
RAD23BP54727 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.31■□□□□ 0.2
RAD23BP54727 HLA-K-203ENST00000430151 1046 ntBASIC16.31■□□□□ 0.2
RAD23BP54727 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.31■□□□□ 0.2
RAD23BP54727 INE1-201ENST00000456273 945 ntBASIC16.31■□□□□ 0.2
RAD23BP54727 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAD23BP54727 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RAD23BP54727 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.31■□□□□ 0.2
RAD23BP54727 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAD23BP54727 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RAD23BP54727 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.31■□□□□ 0.2
RAD23BP54727 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.31■□□□□ 0.2
RAD23BP54727 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RAD23BP54727 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms