Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 PTENP1-202ENST00000532280 3996 ntBASIC13.31□□□□□ -0.28
ATP1B3P54709 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.31□□□□□ -0.28
ATP1B3P54709 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ATP1B3P54709 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
ATP1B3P54709 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 AL080243.2-201ENST00000418783 582 ntBASIC13.31□□□□□ -0.28
ATP1B3P54709 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.31□□□□□ -0.28
ATP1B3P54709 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.31□□□□□ -0.28
ATP1B3P54709 AP006288.1-201ENST00000446065 395 ntBASIC13.31□□□□□ -0.28
ATP1B3P54709 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.31□□□□□ -0.28
ATP1B3P54709 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.31□□□□□ -0.28
ATP1B3P54709 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.31□□□□□ -0.28
ATP1B3P54709 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.31□□□□□ -0.28
ATP1B3P54709 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.31□□□□□ -0.28
ATP1B3P54709 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.31□□□□□ -0.28
ATP1B3P54709 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 CICP11-201ENST00000434745 2827 ntBASIC13.31□□□□□ -0.28
ATP1B3P54709 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ATP1B3P54709 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.31□□□□□ -0.28
ATP1B3P54709 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.31□□□□□ -0.28
ATP1B3P54709 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.31□□□□□ -0.28
ATP1B3P54709 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.31□□□□□ -0.28
ATP1B3P54709 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ATP1B3P54709 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.31□□□□□ -0.28
ATP1B3P54709 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.31□□□□□ -0.28
ATP1B3P54709 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
ATP1B3P54709 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATP1B3P54709 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.3□□□□□ -0.28
ATP1B3P54709 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
ATP1B3P54709 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
ATP1B3P54709 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.3□□□□□ -0.28
ATP1B3P54709 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ATP1B3P54709 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ATP1B3P54709 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
ATP1B3P54709 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
ATP1B3P54709 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
ATP1B3P54709 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
ATP1B3P54709 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 HLA-V-204ENST00000476601 1289 ntBASIC13.3□□□□□ -0.28
ATP1B3P54709 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.3□□□□□ -0.28
ATP1B3P54709 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.3□□□□□ -0.28
ATP1B3P54709 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ATP1B3P54709 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.3□□□□□ -0.28
ATP1B3P54709 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.3□□□□□ -0.28
ATP1B3P54709 AC025048.3-201ENST00000590609 569 ntBASIC13.3□□□□□ -0.28
ATP1B3P54709 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ATP1B3P54709 AC005702.4-201ENST00000618393 416 ntBASIC13.3□□□□□ -0.28
ATP1B3P54709 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.3□□□□□ -0.28
ATP1B3P54709 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
ATP1B3P54709 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.3□□□□□ -0.28
ATP1B3P54709 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.3□□□□□ -0.28
ATP1B3P54709 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.3□□□□□ -0.28
ATP1B3P54709 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
ATP1B3P54709 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATP1B3P54709 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.3□□□□□ -0.28
ATP1B3P54709 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms