Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.53■□□□□ 0.08
NFKB1P19838 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.53■□□□□ 0.08
NFKB1P19838 API5-211ENST00000534695 560 ntTSL 5 BASIC15.53■□□□□ 0.08
NFKB1P19838 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.53■□□□□ 0.08
NFKB1P19838 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
NFKB1P19838 SPDYE22P-201ENST00000582158 798 ntBASIC15.53■□□□□ 0.08
NFKB1P19838 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
NFKB1P19838 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.53■□□□□ 0.08
NFKB1P19838 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NFKB1P19838 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NFKB1P19838 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NFKB1P19838 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NFKB1P19838 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NFKB1P19838 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NFKB1P19838 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NFKB1P19838 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.53■□□□□ 0.08
NFKB1P19838 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.53■□□□□ 0.08
NFKB1P19838 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NFKB1P19838 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.53■□□□□ 0.08
NFKB1P19838 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NFKB1P19838 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.53■□□□□ 0.08
NFKB1P19838 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.53■□□□□ 0.08
NFKB1P19838 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NFKB1P19838 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NFKB1P19838 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NFKB1P19838 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.52■□□□□ 0.08
NFKB1P19838 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
NFKB1P19838 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NFKB1P19838 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NFKB1P19838 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NFKB1P19838 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NFKB1P19838 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.52■□□□□ 0.08
NFKB1P19838 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.52■□□□□ 0.08
NFKB1P19838 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NFKB1P19838 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NFKB1P19838 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NFKB1P19838 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.52■□□□□ 0.08
NFKB1P19838 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.52■□□□□ 0.08
NFKB1P19838 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NFKB1P19838 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.52■□□□□ 0.08
NFKB1P19838 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NFKB1P19838 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NFKB1P19838 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.52■□□□□ 0.08
NFKB1P19838 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.52■□□□□ 0.08
NFKB1P19838 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.52■□□□□ 0.08
NFKB1P19838 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.52■□□□□ 0.08
NFKB1P19838 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NFKB1P19838 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.52■□□□□ 0.08
NFKB1P19838 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NFKB1P19838 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
NFKB1P19838 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
NFKB1P19838 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NFKB1P19838 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.52■□□□□ 0.08
NFKB1P19838 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.52■□□□□ 0.08
NFKB1P19838 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NFKB1P19838 AC099063.4-201ENST00000641099 1602 ntBASIC15.52■□□□□ 0.08
NFKB1P19838 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NFKB1P19838 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NFKB1P19838 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NFKB1P19838 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NFKB1P19838 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NFKB1P19838 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NFKB1P19838 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NFKB1P19838 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
NFKB1P19838 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NFKB1P19838 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NFKB1P19838 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
NFKB1P19838 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NFKB1P19838 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NFKB1P19838 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NFKB1P19838 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
NFKB1P19838 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
NFKB1P19838 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NFKB1P19838 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
NFKB1P19838 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.52■□□□□ 0.07
NFKB1P19838 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.52■□□□□ 0.07
NFKB1P19838 KRT8P22-201ENST00000562317 1415 ntBASIC15.51■□□□□ 0.07
NFKB1P19838 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NFKB1P19838 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NFKB1P19838 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
NFKB1P19838 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NFKB1P19838 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NFKB1P19838 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NFKB1P19838 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NFKB1P19838 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NFKB1P19838 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NFKB1P19838 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NFKB1P19838 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NFKB1P19838 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NFKB1P19838 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.51■□□□□ 0.07
NFKB1P19838 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NFKB1P19838 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NFKB1P19838 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.51■□□□□ 0.07
NFKB1P19838 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
NFKB1P19838 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.51■□□□□ 0.07
NFKB1P19838 ELK1P1-201ENST00000485699 580 ntBASIC15.51■□□□□ 0.07
NFKB1P19838 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.51■□□□□ 0.07
NFKB1P19838 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.51■□□□□ 0.07
NFKB1P19838 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.51■□□□□ 0.07
NFKB1P19838 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms