Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLTAP09496 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLTAP09496 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.73■□□□□ 0.27
CLTAP09496 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLTAP09496 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLTAP09496 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLTAP09496 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLTAP09496 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.73■□□□□ 0.27
CLTAP09496 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLTAP09496 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLTAP09496 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CLTAP09496 BAATP1-201ENST00000412284 1225 ntBASIC16.73■□□□□ 0.27
CLTAP09496 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.73■□□□□ 0.27
CLTAP09496 NUS1P3-201ENST00000423502 862 ntBASIC16.73■□□□□ 0.27
CLTAP09496 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.73■□□□□ 0.27
CLTAP09496 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLTAP09496 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.73■□□□□ 0.27
CLTAP09496 AC233724.13-201ENST00000598383 410 ntBASIC16.73■□□□□ 0.27
CLTAP09496 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLTAP09496 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLTAP09496 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLTAP09496 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
CLTAP09496 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLTAP09496 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLTAP09496 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLTAP09496 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLTAP09496 KRT8P44-201ENST00000441609 1350 ntBASIC16.73■□□□□ 0.27
CLTAP09496 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.73■□□□□ 0.27
CLTAP09496 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLTAP09496 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
CLTAP09496 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.73■□□□□ 0.27
CLTAP09496 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLTAP09496 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLTAP09496 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLTAP09496 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CLTAP09496 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLTAP09496 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLTAP09496 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.73■□□□□ 0.27
CLTAP09496 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLTAP09496 AC007787.1-201ENST00000588095 1583 ntBASIC16.72■□□□□ 0.27
CLTAP09496 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.72■□□□□ 0.27
CLTAP09496 AC138035.3-201ENST00000622706 2791 ntBASIC16.72■□□□□ 0.27
CLTAP09496 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.72■□□□□ 0.27
CLTAP09496 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.72■□□□□ 0.27
CLTAP09496 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CLTAP09496 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLTAP09496 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CLTAP09496 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.72■□□□□ 0.27
CLTAP09496 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLTAP09496 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLTAP09496 AL109954.1-202ENST00000564051 2148 ntBASIC16.72■□□□□ 0.27
CLTAP09496 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLTAP09496 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLTAP09496 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLTAP09496 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLTAP09496 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.72■□□□□ 0.27
CLTAP09496 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLTAP09496 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLTAP09496 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CLTAP09496 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLTAP09496 AC104457.1-201ENST00000401024 814 ntBASIC16.72■□□□□ 0.27
CLTAP09496 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.72■□□□□ 0.27
CLTAP09496 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.72■□□□□ 0.27
CLTAP09496 AC012441.1-201ENST00000446669 685 ntBASIC16.72■□□□□ 0.27
CLTAP09496 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLTAP09496 AC022137.2-201ENST00000503482 481 ntBASIC16.72■□□□□ 0.27
CLTAP09496 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.72■□□□□ 0.27
CLTAP09496 SAMD11P1-201ENST00000571429 661 ntBASIC16.72■□□□□ 0.27
CLTAP09496 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.72■□□□□ 0.27
CLTAP09496 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.72■□□□□ 0.27
CLTAP09496 AP005019.2-201ENST00000615104 511 ntBASIC16.72■□□□□ 0.27
CLTAP09496 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLTAP09496 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.72■□□□□ 0.27
CLTAP09496 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLTAP09496 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.72■□□□□ 0.27
CLTAP09496 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.72■□□□□ 0.27
CLTAP09496 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.72■□□□□ 0.27
CLTAP09496 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.72■□□□□ 0.27
CLTAP09496 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLTAP09496 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLTAP09496 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLTAP09496 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CLTAP09496 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLTAP09496 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLTAP09496 AC134312.5-201ENST00000568031 1313 ntBASIC16.71■□□□□ 0.27
CLTAP09496 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLTAP09496 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLTAP09496 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLTAP09496 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLTAP09496 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLTAP09496 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLTAP09496 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLTAP09496 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
CLTAP09496 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLTAP09496 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLTAP09496 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLTAP09496 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLTAP09496 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.71■□□□□ 0.27
CLTAP09496 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLTAP09496 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms