Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RB1P06400 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RB1P06400 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RB1P06400 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RB1P06400 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.96■□□□□ 0.15
RB1P06400 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RB1P06400 CYP2T1P-202ENST00000641596 2535 ntBASIC15.96■□□□□ 0.15
RB1P06400 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RB1P06400 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RB1P06400 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.96■□□□□ 0.15
RB1P06400 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RB1P06400 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RB1P06400 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RB1P06400 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RB1P06400 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RB1P06400 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RB1P06400 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.96■□□□□ 0.15
RB1P06400 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.96■□□□□ 0.15
RB1P06400 AC078991.1-201ENST00000437297 610 ntBASIC15.96■□□□□ 0.15
RB1P06400 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.96■□□□□ 0.15
RB1P06400 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.96■□□□□ 0.15
RB1P06400 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.96■□□□□ 0.15
RB1P06400 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.96■□□□□ 0.15
RB1P06400 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.96■□□□□ 0.15
RB1P06400 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RB1P06400 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.96■□□□□ 0.15
RB1P06400 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC15.96■□□□□ 0.15
RB1P06400 AL031713.1-201ENST00000564813 661 ntBASIC15.96■□□□□ 0.15
RB1P06400 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.96■□□□□ 0.15
RB1P06400 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RB1P06400 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RB1P06400 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RB1P06400 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RB1P06400 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RB1P06400 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.96■□□□□ 0.15
RB1P06400 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.96■□□□□ 0.15
RB1P06400 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RB1P06400 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.96■□□□□ 0.15
RB1P06400 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RB1P06400 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.96■□□□□ 0.15
RB1P06400 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.96■□□□□ 0.15
RB1P06400 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.96■□□□□ 0.15
RB1P06400 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RB1P06400 AC009093.2-202ENST00000620513 2079 ntBASIC15.96■□□□□ 0.15
RB1P06400 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RB1P06400 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
RB1P06400 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RB1P06400 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RB1P06400 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RB1P06400 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.95■□□□□ 0.14
RB1P06400 AC244394.1-201ENST00000435000 1665 ntBASIC15.95■□□□□ 0.14
RB1P06400 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
RB1P06400 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RB1P06400 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RB1P06400 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.95■□□□□ 0.14
RB1P06400 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RB1P06400 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RB1P06400 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RB1P06400 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RB1P06400 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RB1P06400 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RB1P06400 INE2-201ENST00000630399 1874 ntBASIC15.95■□□□□ 0.14
RB1P06400 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RB1P06400 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
RB1P06400 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RB1P06400 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RB1P06400 AC011840.2-201ENST00000563063 1520 ntBASIC15.95■□□□□ 0.14
RB1P06400 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.95■□□□□ 0.14
RB1P06400 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RB1P06400 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RB1P06400 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RB1P06400 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
RB1P06400 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RB1P06400 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RB1P06400 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.95■□□□□ 0.14
RB1P06400 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.95■□□□□ 0.14
RB1P06400 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RB1P06400 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RB1P06400 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.95■□□□□ 0.14
RB1P06400 RPL7P35-201ENST00000446943 740 ntBASIC15.95■□□□□ 0.14
RB1P06400 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.95■□□□□ 0.14
RB1P06400 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RB1P06400 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RB1P06400 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.95■□□□□ 0.14
RB1P06400 DNM1P30-201ENST00000563586 452 ntBASIC15.95■□□□□ 0.14
RB1P06400 AC135983.4-201ENST00000564116 1262 ntBASIC15.95■□□□□ 0.14
RB1P06400 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.95■□□□□ 0.14
RB1P06400 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.95■□□□□ 0.14
RB1P06400 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.95■□□□□ 0.14
RB1P06400 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.95■□□□□ 0.14
RB1P06400 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RB1P06400 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RB1P06400 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
RB1P06400 FAM90A2P-201ENST00000511144 1395 ntBASIC15.95■□□□□ 0.14
RB1P06400 FAM90A25P-201ENST00000528404 1395 ntBASIC15.95■□□□□ 0.14
RB1P06400 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RB1P06400 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RB1P06400 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.95■□□□□ 0.14
RB1P06400 TNRC18P3-201ENST00000441896 2691 ntBASIC15.95■□□□□ 0.14
RB1P06400 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms