Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HMGCRP04035 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.06■□□□□ 0.32
HMGCRP04035 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.06■□□□□ 0.32
HMGCRP04035 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.06■□□□□ 0.32
HMGCRP04035 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.06■□□□□ 0.32
HMGCRP04035 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCRP04035 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCRP04035 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.05■□□□□ 0.32
HMGCRP04035 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCRP04035 SHC1P1-201ENST00000425230 1745 ntBASIC17.05■□□□□ 0.32
HMGCRP04035 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCRP04035 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCRP04035 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCRP04035 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HMGCRP04035 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC17.05■□□□□ 0.32
HMGCRP04035 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCRP04035 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCRP04035 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCRP04035 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCRP04035 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC17.05■□□□□ 0.32
HMGCRP04035 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.05■□□□□ 0.32
HMGCRP04035 AC078991.1-201ENST00000437297 610 ntBASIC17.05■□□□□ 0.32
HMGCRP04035 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.05■□□□□ 0.32
HMGCRP04035 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.05■□□□□ 0.32
HMGCRP04035 AC009779.1-201ENST00000551138 283 ntBASIC17.05■□□□□ 0.32
HMGCRP04035 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.05■□□□□ 0.32
HMGCRP04035 DUX4L46-201ENST00000566845 751 ntBASIC17.05■□□□□ 0.32
HMGCRP04035 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.05■□□□□ 0.32
HMGCRP04035 AC087045.2-201ENST00000606279 1003 ntBASIC17.05■□□□□ 0.32
HMGCRP04035 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HMGCRP04035 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCRP04035 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCRP04035 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCRP04035 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCRP04035 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGCRP04035 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCRP04035 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCRP04035 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCRP04035 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HMGCRP04035 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCRP04035 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCRP04035 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.04■□□□□ 0.32
HMGCRP04035 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCRP04035 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HMGCRP04035 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HMGCRP04035 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HMGCRP04035 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.04■□□□□ 0.32
HMGCRP04035 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
HMGCRP04035 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
HMGCRP04035 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
HMGCRP04035 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCRP04035 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.04■□□□□ 0.32
HMGCRP04035 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCRP04035 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCRP04035 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.04■□□□□ 0.32
HMGCRP04035 HLA-K-203ENST00000430151 1046 ntBASIC17.04■□□□□ 0.32
HMGCRP04035 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HMGCRP04035 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.04■□□□□ 0.32
HMGCRP04035 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCRP04035 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.04■□□□□ 0.32
HMGCRP04035 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.04■□□□□ 0.32
HMGCRP04035 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.04■□□□□ 0.32
HMGCRP04035 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.04■□□□□ 0.32
HMGCRP04035 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.04■□□□□ 0.32
HMGCRP04035 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.04■□□□□ 0.32
HMGCRP04035 AC092171.5-201ENST00000608012 942 ntBASIC17.04■□□□□ 0.32
HMGCRP04035 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.04■□□□□ 0.32
HMGCRP04035 AC051619.9-201ENST00000623237 597 ntBASIC17.04■□□□□ 0.32
HMGCRP04035 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCRP04035 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HMGCRP04035 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCRP04035 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCRP04035 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.04■□□□□ 0.32
HMGCRP04035 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCRP04035 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.04■□□□□ 0.32
HMGCRP04035 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.04■□□□□ 0.32
HMGCRP04035 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCRP04035 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMGCRP04035 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.04■□□□□ 0.32
HMGCRP04035 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.04■□□□□ 0.32
HMGCRP04035 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HMGCRP04035 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HMGCRP04035 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.03■□□□□ 0.32
HMGCRP04035 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCRP04035 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.03■□□□□ 0.32
HMGCRP04035 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCRP04035 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HMGCRP04035 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms