Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND3P03897 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND3P03897 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND3P03897 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
MT-ND3P03897 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND3P03897 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.63■□□□□ 0.09
MT-ND3P03897 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND3P03897 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.63■□□□□ 0.09
MT-ND3P03897 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND3P03897 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND3P03897 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND3P03897 REXO1L2P-201ENST00000425429 2069 ntBASIC15.63■□□□□ 0.09
MT-ND3P03897 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND3P03897 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND3P03897 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
MT-ND3P03897 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND3P03897 AC236430.1-201ENST00000402231 743 ntBASIC15.63■□□□□ 0.09
MT-ND3P03897 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.63■□□□□ 0.09
MT-ND3P03897 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.63■□□□□ 0.09
MT-ND3P03897 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.63■□□□□ 0.09
MT-ND3P03897 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.63■□□□□ 0.09
MT-ND3P03897 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND3P03897 AC027369.6-201ENST00000525520 931 ntBASIC15.63■□□□□ 0.09
MT-ND3P03897 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.63■□□□□ 0.09
MT-ND3P03897 AC239800.4-201ENST00000603712 296 ntBASIC15.63■□□□□ 0.09
MT-ND3P03897 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND3P03897 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.63■□□□□ 0.09
MT-ND3P03897 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND3P03897 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.63■□□□□ 0.09
MT-ND3P03897 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND3P03897 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
MT-ND3P03897 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND3P03897 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND3P03897 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND3P03897 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND3P03897 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND3P03897 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND3P03897 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
MT-ND3P03897 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND3P03897 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MT-ND3P03897 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.63■□□□□ 0.09
MT-ND3P03897 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.63■□□□□ 0.09
MT-ND3P03897 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND3P03897 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND3P03897 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
MT-ND3P03897 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.62■□□□□ 0.09
MT-ND3P03897 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
MT-ND3P03897 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND3P03897 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.62■□□□□ 0.09
MT-ND3P03897 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND3P03897 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND3P03897 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND3P03897 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
MT-ND3P03897 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.62■□□□□ 0.09
MT-ND3P03897 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.62■□□□□ 0.09
MT-ND3P03897 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.62■□□□□ 0.09
MT-ND3P03897 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.62■□□□□ 0.09
MT-ND3P03897 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.62■□□□□ 0.09
MT-ND3P03897 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.62■□□□□ 0.09
MT-ND3P03897 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.62■□□□□ 0.09
MT-ND3P03897 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.62■□□□□ 0.09
MT-ND3P03897 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.62■□□□□ 0.09
MT-ND3P03897 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.62■□□□□ 0.09
MT-ND3P03897 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.62■□□□□ 0.09
MT-ND3P03897 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.62■□□□□ 0.09
MT-ND3P03897 AC008761.3-201ENST00000624803 892 ntBASIC15.62■□□□□ 0.09
MT-ND3P03897 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND3P03897 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND3P03897 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND3P03897 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.62■□□□□ 0.09
MT-ND3P03897 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND3P03897 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND3P03897 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND3P03897 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.62■□□□□ 0.09
MT-ND3P03897 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.62■□□□□ 0.09
MT-ND3P03897 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND3P03897 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
MT-ND3P03897 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND3P03897 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND3P03897 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND3P03897 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
MT-ND3P03897 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-ND3P03897 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.62■□□□□ 0.09
MT-ND3P03897 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND3P03897 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND3P03897 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
MT-ND3P03897 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.61■□□□□ 0.09
MT-ND3P03897 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.61■□□□□ 0.09
MT-ND3P03897 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND3P03897 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND3P03897 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.61■□□□□ 0.09
MT-ND3P03897 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND3P03897 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND3P03897 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.61■□□□□ 0.09
MT-ND3P03897 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
MT-ND3P03897 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND3P03897 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND3P03897 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-ND3P03897 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
MT-ND3P03897 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms