Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC011474.4-201ENST00000623523 2076 ntBASIC12.51□□□□□ -0.41
SSSCA1O60232 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
SSSCA1O60232 AC002056.1-201ENST00000395613 760 ntBASIC12.51□□□□□ -0.41
SSSCA1O60232 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.51□□□□□ -0.41
SSSCA1O60232 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SSSCA1O60232 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.51□□□□□ -0.41
SSSCA1O60232 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.51□□□□□ -0.41
SSSCA1O60232 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.51□□□□□ -0.41
SSSCA1O60232 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.51□□□□□ -0.41
SSSCA1O60232 KRT19P2-202ENST00000557173 1012 ntBASIC12.51□□□□□ -0.41
SSSCA1O60232 RARRES2P8-201ENST00000566335 367 ntBASIC12.51□□□□□ -0.41
SSSCA1O60232 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.51□□□□□ -0.41
SSSCA1O60232 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.51□□□□□ -0.41
SSSCA1O60232 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.51□□□□□ -0.41
SSSCA1O60232 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 AC015802.1-201ENST00000588104 1449 ntBASIC12.51□□□□□ -0.41
SSSCA1O60232 AC138969.3-201ENST00000546612 1459 ntBASIC12.51□□□□□ -0.41
SSSCA1O60232 AC138932.2-201ENST00000548268 1459 ntBASIC12.51□□□□□ -0.41
SSSCA1O60232 AC126755.4-201ENST00000549796 1459 ntBASIC12.51□□□□□ -0.41
SSSCA1O60232 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.51□□□□□ -0.41
SSSCA1O60232 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.51□□□□□ -0.41
SSSCA1O60232 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SSSCA1O60232 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.5□□□□□ -0.41
SSSCA1O60232 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.5□□□□□ -0.41
SSSCA1O60232 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 MST1P2-201ENST00000457982 2291 ntBASIC12.5□□□□□ -0.41
SSSCA1O60232 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.5□□□□□ -0.41
SSSCA1O60232 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SSSCA1O60232 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.5□□□□□ -0.41
SSSCA1O60232 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.5□□□□□ -0.41
SSSCA1O60232 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.5□□□□□ -0.41
SSSCA1O60232 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 FAM220BP-201ENST00000377689 816 ntBASIC12.5□□□□□ -0.41
SSSCA1O60232 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.5□□□□□ -0.41
SSSCA1O60232 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.5□□□□□ -0.41
SSSCA1O60232 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.5□□□□□ -0.41
SSSCA1O60232 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.5□□□□□ -0.41
SSSCA1O60232 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC12.5□□□□□ -0.41
SSSCA1O60232 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SSSCA1O60232 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.5□□□□□ -0.41
SSSCA1O60232 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.5□□□□□ -0.41
SSSCA1O60232 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.5□□□□□ -0.41
SSSCA1O60232 AC027307.2-201ENST00000591252 911 ntBASIC12.5□□□□□ -0.41
SSSCA1O60232 AL121912.1-201ENST00000603683 238 ntBASIC12.5□□□□□ -0.41
SSSCA1O60232 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.5□□□□□ -0.41
SSSCA1O60232 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SSSCA1O60232 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.5□□□□□ -0.41
SSSCA1O60232 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.5□□□□□ -0.41
SSSCA1O60232 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.5□□□□□ -0.41
SSSCA1O60232 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
SSSCA1O60232 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SSSCA1O60232 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SSSCA1O60232 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
SSSCA1O60232 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SSSCA1O60232 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SSSCA1O60232 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSSCA1O60232 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SSSCA1O60232 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.5□□□□□ -0.41
SSSCA1O60232 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms