Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 RPL13P2-201ENST00000440687 659 ntBASIC11□□□□□ -0.65
PAX4O43316 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11□□□□□ -0.65
PAX4O43316 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC11□□□□□ -0.65
PAX4O43316 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC11□□□□□ -0.65
PAX4O43316 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC11□□□□□ -0.65
PAX4O43316 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11□□□□□ -0.65
PAX4O43316 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC11□□□□□ -0.65
PAX4O43316 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC11□□□□□ -0.65
PAX4O43316 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC11□□□□□ -0.65
PAX4O43316 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC11□□□□□ -0.65
PAX4O43316 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
PAX4O43316 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC11□□□□□ -0.65
PAX4O43316 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11□□□□□ -0.65
PAX4O43316 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC11□□□□□ -0.65
PAX4O43316 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
PAX4O43316 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC11□□□□□ -0.65
PAX4O43316 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC11□□□□□ -0.65
PAX4O43316 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC11□□□□□ -0.65
PAX4O43316 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC11□□□□□ -0.65
PAX4O43316 AC022532.1-201ENST00000624563 1728 ntBASIC11□□□□□ -0.65
PAX4O43316 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC11□□□□□ -0.65
PAX4O43316 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC11□□□□□ -0.65
PAX4O43316 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC11□□□□□ -0.65
PAX4O43316 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC11□□□□□ -0.65
PAX4O43316 AC138969.3-201ENST00000546612 1459 ntBASIC11□□□□□ -0.65
PAX4O43316 AC138932.2-201ENST00000548268 1459 ntBASIC11□□□□□ -0.65
PAX4O43316 AC126755.4-201ENST00000549796 1459 ntBASIC11□□□□□ -0.65
PAX4O43316 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
PAX4O43316 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC10.99□□□□□ -0.65
PAX4O43316 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
PAX4O43316 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC10.99□□□□□ -0.65
PAX4O43316 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
PAX4O43316 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC10.99□□□□□ -0.65
PAX4O43316 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
PAX4O43316 LCK-206ENST00000373564 2137 ntTSL 5 BASIC10.99□□□□□ -0.65
PAX4O43316 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 TK1-203ENST00000588734 1681 ntTSL 2 BASIC10.99□□□□□ -0.65
PAX4O43316 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
PAX4O43316 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
PAX4O43316 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC10.99□□□□□ -0.65
PAX4O43316 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC10.99□□□□□ -0.65
PAX4O43316 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
PAX4O43316 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 AL133267.1-201ENST00000398220 340 ntBASIC10.99□□□□□ -0.65
PAX4O43316 RPL5P21-201ENST00000404620 815 ntBASIC10.99□□□□□ -0.65
PAX4O43316 AC074338.1-201ENST00000416825 156 ntBASIC10.99□□□□□ -0.65
PAX4O43316 EIF2S2P3-201ENST00000428356 999 ntBASIC10.99□□□□□ -0.65
PAX4O43316 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC10.99□□□□□ -0.65
PAX4O43316 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
PAX4O43316 KRT18P43-201ENST00000469825 1281 ntBASIC10.99□□□□□ -0.65
PAX4O43316 MEIS3P1-201ENST00000495167 958 ntBASIC10.99□□□□□ -0.65
PAX4O43316 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC10.99□□□□□ -0.65
PAX4O43316 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC10.99□□□□□ -0.65
PAX4O43316 REEP4-207ENST00000523293 913 ntTSL 3 BASIC10.99□□□□□ -0.65
PAX4O43316 AC009407.1-201ENST00000568958 598 ntBASIC10.99□□□□□ -0.65
PAX4O43316 AC022148.2-201ENST00000586176 560 ntBASIC10.99□□□□□ -0.65
PAX4O43316 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
PAX4O43316 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 AC008738.7-201ENST00000609744 511 ntBASIC10.99□□□□□ -0.65
PAX4O43316 AC008147.4-201ENST00000617570 1204 ntBASIC10.99□□□□□ -0.65
PAX4O43316 GAPDHP74-202ENST00000632456 782 ntBASIC10.99□□□□□ -0.65
PAX4O43316 AL034417.3-201ENST00000641100 1043 ntBASIC10.99□□□□□ -0.65
PAX4O43316 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PAX4O43316 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC10.99□□□□□ -0.65
PAX4O43316 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms