Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RNF113AO15541 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF113AO15541 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF113AO15541 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF113AO15541 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF113AO15541 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF113AO15541 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF113AO15541 AC023090.2-201ENST00000625182 2110 ntBASIC18.23■□□□□ 0.51
RNF113AO15541 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF113AO15541 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RNF113AO15541 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RNF113AO15541 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF113AO15541 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF113AO15541 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
RNF113AO15541 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF113AO15541 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF113AO15541 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF113AO15541 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RNF113AO15541 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF113AO15541 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF113AO15541 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF113AO15541 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF113AO15541 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF113AO15541 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF113AO15541 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF113AO15541 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RNF113AO15541 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
RNF113AO15541 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF113AO15541 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF113AO15541 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF113AO15541 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF113AO15541 AC011270.2-201ENST00000624293 2550 ntBASIC18.22■□□□□ 0.51
RNF113AO15541 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF113AO15541 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RNF113AO15541 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF113AO15541 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF113AO15541 OR8S1-201ENST00000310194 1080 ntBASIC18.22■□□□□ 0.51
RNF113AO15541 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
RNF113AO15541 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RNF113AO15541 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC18.22■□□□□ 0.51
RNF113AO15541 RPL7P3-201ENST00000441388 714 ntBASIC18.22■□□□□ 0.51
RNF113AO15541 AL590640.2-201ENST00000457038 527 ntBASIC18.22■□□□□ 0.51
RNF113AO15541 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF113AO15541 RNA5SP486-201ENST00000515961 83 ntBASIC18.22■□□□□ 0.51
RNF113AO15541 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.22■□□□□ 0.51
RNF113AO15541 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF113AO15541 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.22■□□□□ 0.51
RNF113AO15541 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.22■□□□□ 0.51
RNF113AO15541 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF113AO15541 MIR6775-201ENST00000617557 69 ntBASIC18.22■□□□□ 0.51
RNF113AO15541 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF113AO15541 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF113AO15541 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.22■□□□□ 0.51
RNF113AO15541 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF113AO15541 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RNF113AO15541 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF113AO15541 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF113AO15541 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF113AO15541 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF113AO15541 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF113AO15541 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF113AO15541 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF113AO15541 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF113AO15541 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF113AO15541 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF113AO15541 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF113AO15541 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF113AO15541 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF113AO15541 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF113AO15541 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF113AO15541 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF113AO15541 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
RNF113AO15541 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF113AO15541 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF113AO15541 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RNF113AO15541 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF113AO15541 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RNF113AO15541 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF113AO15541 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF113AO15541 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF113AO15541 CTBP2P5-201ENST00000454986 1264 ntBASIC18.21■□□□□ 0.51
RNF113AO15541 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RNF113AO15541 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RNF113AO15541 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF113AO15541 AC078819.1-201ENST00000547454 765 ntBASIC18.21■□□□□ 0.51
RNF113AO15541 AC012085.1-201ENST00000548270 765 ntBASIC18.21■□□□□ 0.51
RNF113AO15541 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.21■□□□□ 0.51
RNF113AO15541 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF113AO15541 ECM1P1-201ENST00000604092 1279 ntBASIC18.21■□□□□ 0.51
RNF113AO15541 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF113AO15541 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RNF113AO15541 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RNF113AO15541 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF113AO15541 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF113AO15541 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF113AO15541 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF113AO15541 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF113AO15541 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF113AO15541 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF113AO15541 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms