Protein–RNA interactions for Protein: I3L3R5

CCER2, Coiled-coil domain-containing glutamate-rich protein 2, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER2I3L3R5 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC20.6■□□□□ 0.89
CCER2I3L3R5 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCER2I3L3R5 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCER2I3L3R5 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCER2I3L3R5 MST1P2-201ENST00000457982 2291 ntBASIC20.6■□□□□ 0.89
CCER2I3L3R5 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCER2I3L3R5 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCER2I3L3R5 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CCER2I3L3R5 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCER2I3L3R5 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCER2I3L3R5 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCER2I3L3R5 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CCER2I3L3R5 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCER2I3L3R5 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCER2I3L3R5 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC20.59■□□□□ 0.89
CCER2I3L3R5 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CCER2I3L3R5 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCER2I3L3R5 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC20.59■□□□□ 0.89
CCER2I3L3R5 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCER2I3L3R5 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCER2I3L3R5 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCER2I3L3R5 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCER2I3L3R5 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCER2I3L3R5 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCER2I3L3R5 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CCER2I3L3R5 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC20.59■□□□□ 0.89
CCER2I3L3R5 AC069120.2-201ENST00000524091 540 ntBASIC20.59■□□□□ 0.89
CCER2I3L3R5 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20.59■□□□□ 0.89
CCER2I3L3R5 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.59■□□□□ 0.89
CCER2I3L3R5 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC20.59■□□□□ 0.89
CCER2I3L3R5 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC20.59■□□□□ 0.89
CCER2I3L3R5 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.59■□□□□ 0.89
CCER2I3L3R5 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCER2I3L3R5 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCER2I3L3R5 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CCER2I3L3R5 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC20.59■□□□□ 0.89
CCER2I3L3R5 AC090505.1-201ENST00000430515 1834 ntBASIC20.59■□□□□ 0.89
CCER2I3L3R5 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCER2I3L3R5 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCER2I3L3R5 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCER2I3L3R5 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CCER2I3L3R5 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCER2I3L3R5 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CCER2I3L3R5 RERG-209ENST00000546331 1383 ntTSL 2 BASIC20.59■□□□□ 0.89
CCER2I3L3R5 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCER2I3L3R5 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC20.58■□□□□ 0.89
CCER2I3L3R5 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCER2I3L3R5 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC20.58■□□□□ 0.89
CCER2I3L3R5 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCER2I3L3R5 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCER2I3L3R5 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CCER2I3L3R5 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC20.58■□□□□ 0.89
CCER2I3L3R5 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCER2I3L3R5 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCER2I3L3R5 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCER2I3L3R5 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCER2I3L3R5 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CCER2I3L3R5 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.58■□□□□ 0.89
CCER2I3L3R5 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.58■□□□□ 0.89
CCER2I3L3R5 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCER2I3L3R5 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CCER2I3L3R5 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC20.58■□□□□ 0.89
CCER2I3L3R5 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.58■□□□□ 0.89
CCER2I3L3R5 AC027369.6-201ENST00000525520 931 ntBASIC20.58■□□□□ 0.89
CCER2I3L3R5 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.58■□□□□ 0.89
CCER2I3L3R5 AC140878.1-201ENST00000565277 250 ntBASIC20.58■□□□□ 0.89
CCER2I3L3R5 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CCER2I3L3R5 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCER2I3L3R5 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC20.58■□□□□ 0.89
CCER2I3L3R5 PRSS30P-206ENST00000641773 873 ntBASIC20.58■□□□□ 0.89
CCER2I3L3R5 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCER2I3L3R5 API5-203ENST00000455725 2257 ntTSL 2 BASIC20.58■□□□□ 0.88
CCER2I3L3R5 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CCER2I3L3R5 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CCER2I3L3R5 AC015656.1-201ENST00000624209 3578 ntBASIC20.58■□□□□ 0.88
CCER2I3L3R5 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC20.58■□□□□ 0.88
CCER2I3L3R5 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC20.58■□□□□ 0.88
CCER2I3L3R5 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC20.58■□□□□ 0.88
CCER2I3L3R5 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CCER2I3L3R5 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCER2I3L3R5 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCER2I3L3R5 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCER2I3L3R5 AL138799.1-201ENST00000448213 1675 ntBASIC20.58■□□□□ 0.88
CCER2I3L3R5 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
CCER2I3L3R5 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC20.57■□□□□ 0.88
CCER2I3L3R5 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCER2I3L3R5 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCER2I3L3R5 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC20.57■□□□□ 0.88
CCER2I3L3R5 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCER2I3L3R5 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCER2I3L3R5 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCER2I3L3R5 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCER2I3L3R5 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.57■□□□□ 0.88
CCER2I3L3R5 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC20.57■□□□□ 0.88
CCER2I3L3R5 AC009477.1-201ENST00000452936 217 ntBASIC20.57■□□□□ 0.88
CCER2I3L3R5 RHOA-206ENST00000454011 889 ntTSL 2 BASIC20.57■□□□□ 0.88
CCER2I3L3R5 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC20.57■□□□□ 0.88
CCER2I3L3R5 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.57■□□□□ 0.88
CCER2I3L3R5 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC20.57■□□□□ 0.88
CCER2I3L3R5 DUX4L47-201ENST00000566374 394 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms