Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 SSR4P1-203ENST00000599569 2260 ntBASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 B9D1-203ENST00000395615 805 ntTSL 3 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 PGGT1BP2-201ENST00000398621 1028 ntBASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 AL512384.1-201ENST00000406683 331 ntBASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 POLE2-203ENST00000553805 496 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 AC012645.4-201ENST00000610691 1061 ntBASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 DKFZP434A062-201ENST00000573103 5021 ntBASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SMIM9A6NGZ8 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.1□□□□□ -0.63
SMIM9A6NGZ8 AC093525.8-201ENST00000624099 1342 ntBASIC11.1□□□□□ -0.63
SMIM9A6NGZ8 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM9A6NGZ8 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SMIM9A6NGZ8 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM9A6NGZ8 AC105917.1-201ENST00000506637 2539 ntBASIC11.1□□□□□ -0.63
SMIM9A6NGZ8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM9A6NGZ8 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM9A6NGZ8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM9A6NGZ8 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM9A6NGZ8 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM9A6NGZ8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC11.1□□□□□ -0.63
SMIM9A6NGZ8 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM9A6NGZ8 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM9A6NGZ8 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM9A6NGZ8 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM9A6NGZ8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM9A6NGZ8 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM9A6NGZ8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM9A6NGZ8 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM9A6NGZ8 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM9A6NGZ8 RPS15-201ENST00000233609 534 ntTSL 2 BASIC11.1□□□□□ -0.63
SMIM9A6NGZ8 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM9A6NGZ8 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM9A6NGZ8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms