Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 AC072061.1-201ENST00000569710 2234 ntBASIC10.73□□□□□ -0.69
LINC01546A6NGU7 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 CRYGEP-201ENST00000412192 528 ntBASIC10.73□□□□□ -0.69
LINC01546A6NGU7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 USP40-206ENST00000443711 628 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 RNPS1P1-201ENST00000507437 918 ntBASIC10.73□□□□□ -0.69
LINC01546A6NGU7 UNC93B6-202ENST00000528242 690 ntBASIC10.73□□□□□ -0.69
LINC01546A6NGU7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 MAX-210ENST00000555419 765 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 RARRES2P8-201ENST00000566335 367 ntBASIC10.73□□□□□ -0.69
LINC01546A6NGU7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 AC027307.2-201ENST00000591252 911 ntBASIC10.73□□□□□ -0.69
LINC01546A6NGU7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 AP000550.4-202ENST00000639755 178 ntBASIC10.73□□□□□ -0.69
LINC01546A6NGU7 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 AC005562.1-201ENST00000583030 3219 ntBASIC10.73□□□□□ -0.69
LINC01546A6NGU7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 AC067750.1-201ENST00000608826 6545 ntBASIC10.73□□□□□ -0.69
LINC01546A6NGU7 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 AKAP8P1-201ENST00000434743 1349 ntBASIC10.73□□□□□ -0.69
LINC01546A6NGU7 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 AC024075.2-201ENST00000598112 1473 ntBASIC10.73□□□□□ -0.69
LINC01546A6NGU7 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 OS9-206ENST00000435406 2346 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC01546A6NGU7 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LINC01546A6NGU7 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms