Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TRBV6-7A0A0A0MS04 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 REXO1L4P-201ENST00000605109 1937 ntBASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 AC023141.5-201ENST00000458585 616 ntBASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 AL671883.3-201ENST00000603274 991 ntBASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 AC025181.2-201ENST00000606994 802 ntBASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 AP001059.3-201ENST00000619053 235 ntBASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 LINC00628-201ENST00000628516 1289 ntBASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV6-7A0A0A0MS04 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 OR2I1P-209ENST00000641730 5365 ntBASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 RPL13P2-201ENST00000440687 659 ntBASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms