Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 POR-201ENST00000394893 2532 ntTSL 5 BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
TRGV1A0A0A0MS02 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
TRGV1A0A0A0MS02 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC11.15□□□□□ -0.63
TRGV1A0A0A0MS02 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
TRGV1A0A0A0MS02 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
TRGV1A0A0A0MS02 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
TRGV1A0A0A0MS02 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
TRGV1A0A0A0MS02 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC11.15□□□□□ -0.63
TRGV1A0A0A0MS02 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
TRGV1A0A0A0MS02 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC11.15□□□□□ -0.63
TRGV1A0A0A0MS02 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
TRGV1A0A0A0MS02 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 RER1-203ENST00000378513 3000 ntTSL 3 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 AGAP7P-201ENST00000582299 2062 ntBASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 AGAP14-201ENST00000624701 2060 ntBASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 ZNF890P-202ENST00000530367 1156 ntBASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 TEX48-202ENST00000612244 662 ntTSL 3 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 ORC5-208ENST00000626700 344 ntTSL 3 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
TRGV1A0A0A0MS02 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 FP325330.2-201ENST00000624219 5630 ntBASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 BTBD7P1-201ENST00000447253 1453 ntBASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TRGV1A0A0A0MS02 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms