Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC7.81□□□□□ -1.16
LINC01558Q9Y6Z2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LINC01558Q9Y6Z2 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LINC01558Q9Y6Z2 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC7.81□□□□□ -1.16
LINC01558Q9Y6Z2 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LINC01558Q9Y6Z2 FSCN1P1-201ENST00000568912 1481 ntBASIC7.81□□□□□ -1.16
LINC01558Q9Y6Z2 CSAD-201ENST00000267085 2645 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LINC01558Q9Y6Z2 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC7.81□□□□□ -1.16
LINC01558Q9Y6Z2 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC7.81□□□□□ -1.16
LINC01558Q9Y6Z2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
LINC01558Q9Y6Z2 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 PIGO-202ENST00000361778 2464 ntTSL 5 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 AC237221.1-202ENST00000563054 2947 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 GHET1-201ENST00000627071 1906 ntBASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 AL355102.3-201ENST00000554299 1678 ntBASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 AC008040.2-201ENST00000461049 708 ntBASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 GLT8D2-201ENST00000360814 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 CICP18-201ENST00000406017 2812 ntBASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 KRT89P-201ENST00000620027 1478 ntBASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 AKR1C8P-201ENST00000578467 2182 ntTSL 2 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 TRERF1-202ENST00000354325 4138 ntTSL 5 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 AC005906.2-201ENST00000640877 3408 ntTSL 5 BASIC7.8□□□□□ -1.16
LINC01558Q9Y6Z2 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms