Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CISHQ9NSE2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CISHQ9NSE2 KRT8P35-201ENST00000483942 1338 ntBASIC16.25■□□□□ 0.19
CISHQ9NSE2 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.25■□□□□ 0.19
CISHQ9NSE2 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
CISHQ9NSE2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CISHQ9NSE2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CISHQ9NSE2 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.25■□□□□ 0.19
CISHQ9NSE2 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CISHQ9NSE2 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CISHQ9NSE2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CISHQ9NSE2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CISHQ9NSE2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CISHQ9NSE2 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CISHQ9NSE2 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
CISHQ9NSE2 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.25■□□□□ 0.19
CISHQ9NSE2 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.25■□□□□ 0.19
CISHQ9NSE2 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.25■□□□□ 0.19
CISHQ9NSE2 TTTY23B-201ENST00000442790 549 ntBASIC16.25■□□□□ 0.19
CISHQ9NSE2 AC022616.1-201ENST00000518688 554 ntBASIC16.25■□□□□ 0.19
CISHQ9NSE2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.25■□□□□ 0.19
CISHQ9NSE2 AC068587.3-201ENST00000526613 355 ntBASIC16.25■□□□□ 0.19
CISHQ9NSE2 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.25■□□□□ 0.19
CISHQ9NSE2 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.25■□□□□ 0.19
CISHQ9NSE2 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.25■□□□□ 0.19
CISHQ9NSE2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.25■□□□□ 0.19
CISHQ9NSE2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CISHQ9NSE2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CISHQ9NSE2 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.25■□□□□ 0.19
CISHQ9NSE2 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.25■□□□□ 0.19
CISHQ9NSE2 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CISHQ9NSE2 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.25■□□□□ 0.19
CISHQ9NSE2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CISHQ9NSE2 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CISHQ9NSE2 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CISHQ9NSE2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.25■□□□□ 0.19
CISHQ9NSE2 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CISHQ9NSE2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CISHQ9NSE2 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CISHQ9NSE2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.24■□□□□ 0.19
CISHQ9NSE2 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CISHQ9NSE2 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CISHQ9NSE2 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CISHQ9NSE2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CISHQ9NSE2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CISHQ9NSE2 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CISHQ9NSE2 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CISHQ9NSE2 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CISHQ9NSE2 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.24■□□□□ 0.19
CISHQ9NSE2 TMEM14DP-201ENST00000422205 345 ntBASIC16.24■□□□□ 0.19
CISHQ9NSE2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.24■□□□□ 0.19
CISHQ9NSE2 EIF3FP3-201ENST00000434851 1086 ntBASIC16.24■□□□□ 0.19
CISHQ9NSE2 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.24■□□□□ 0.19
CISHQ9NSE2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.24■□□□□ 0.19
CISHQ9NSE2 DUX4L47-201ENST00000566374 394 ntBASIC16.24■□□□□ 0.19
CISHQ9NSE2 AC015936.2-201ENST00000593177 259 ntBASIC16.24■□□□□ 0.19
CISHQ9NSE2 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.24■□□□□ 0.19
CISHQ9NSE2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CISHQ9NSE2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CISHQ9NSE2 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CISHQ9NSE2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 AC103702.1-201ENST00000548801 2630 ntBASIC16.24■□□□□ 0.19
CISHQ9NSE2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
CISHQ9NSE2 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 LRRC59-203ENST00000576448 1531 ntBASIC16.24■□□□□ 0.19
CISHQ9NSE2 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.24■□□□□ 0.19
CISHQ9NSE2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CISHQ9NSE2 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CISHQ9NSE2 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CISHQ9NSE2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CISHQ9NSE2 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.23■□□□□ 0.19
CISHQ9NSE2 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CISHQ9NSE2 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.23■□□□□ 0.19
CISHQ9NSE2 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
CISHQ9NSE2 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CISHQ9NSE2 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.23■□□□□ 0.19
CISHQ9NSE2 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CISHQ9NSE2 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms